Gene : AT3G30820 A. thaliana TAIR10
Defline:  (1 of 3) PF03078 - ATHILA ORF-1 family (ATHILA) Genomic Order:  3200
Name:  ? AT3G30820 Secondary Identifier:  ? PAC:19660923
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G30820 0.5kb upstream 0.5kb upstream 1893 true Chr3: 12529343-12531235 Arabidopsis thaliana
AT3G30820 0.5kb upstream 0.5kb upstream 500 false Chr3: 12529343-12529842 Arabidopsis thaliana
AT3G30820 0.5kb downstream 0.5kb downstream 1893 true Chr3: 12529843-12531735 Arabidopsis thaliana
AT3G30820 0.5kb downstream 0.5kb downstream 500 false Chr3: 12531236-12531735 Arabidopsis thaliana
AT3G30820 1.0kb upstream 1.0kb upstream 2393 true Chr3: 12528843-12531235 Arabidopsis thaliana
AT3G30820 1.0kb upstream 1.0kb upstream 1000 false Chr3: 12528843-12529842 Arabidopsis thaliana
AT3G30820 1.0kb downstream 1.0kb downstream 2393 true Chr3: 12529843-12532235 Arabidopsis thaliana
AT3G30820 1.0kb downstream 1.0kb downstream 1000 false Chr3: 12531236-12532235 Arabidopsis thaliana
AT3G30820 2.0kb upstream 2.0kb upstream 3393 true Chr3: 12527843-12531235 Arabidopsis thaliana
AT3G30820 2.0kb upstream 2.0kb upstream 2000 false Chr3: 12527843-12529842 Arabidopsis thaliana
AT3G30820 2.0kb downstream 2.0kb downstream 3393 true Chr3: 12529843-12533235 Arabidopsis thaliana
AT3G30820 2.0kb downstream 2.0kb downstream 2000 false Chr3: 12531236-12533235 Arabidopsis thaliana
AT3G30820 5.0kb upstream 5.0kb upstream 6393 true Chr3: 12524843-12531235 Arabidopsis thaliana
AT3G30820 5.0kb upstream 5.0kb upstream 5000 false Chr3: 12524843-12529842 Arabidopsis thaliana
AT3G30820 5.0kb downstream 5.0kb downstream 6393 true Chr3: 12529843-12536235 Arabidopsis thaliana
AT3G30820 5.0kb downstream 5.0kb downstream 5000 false Chr3: 12531236-12536235 Arabidopsis thaliana
AT3G30820 10.0kb upstream 10.0kb upstream 11393 true Chr3: 12519843-12531235 Arabidopsis thaliana
AT3G30820 10.0kb upstream 10.0kb upstream 10000 false Chr3: 12519843-12529842 Arabidopsis thaliana
AT3G30820 10.0kb downstream 10.0kb downstream 11393 true Chr3: 12529843-12541235 Arabidopsis thaliana
AT3G30820 10.0kb downstream 10.0kb downstream 10000 false Chr3: 12531236-12541235 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121492547 5273 Angiosperm View MSA
122327378 5261 Brassicaceae View MSA
123768812 5264 Brassicales-Malvales View MSA
124267393 5266 SBM View MSA
124123718 5268 Malvidae View MSA
123852832 5270 Rosid View MSA
123438948 5271 Pentapetalae View MSA
122474548 5272 Eudicot View MSA
120765925 5274 Embryophyte View MSA
122808339 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain