Gene : AT3G30580 A. thaliana TAIR10
Genomic Order:  3189 Name:  ? AT3G30580
Secondary Identifier:  ? PAC:19663267
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G30580 0.5kb upstream 0.5kb upstream 887 true Chr3: 12167767-12168653 Arabidopsis thaliana
AT3G30580 0.5kb upstream 0.5kb upstream 500 false Chr3: 12168154-12168653 Arabidopsis thaliana
AT3G30580 0.5kb downstream 0.5kb downstream 887 true Chr3: 12167267-12168153 Arabidopsis thaliana
AT3G30580 0.5kb downstream 0.5kb downstream 500 false Chr3: 12167267-12167766 Arabidopsis thaliana
AT3G30580 1.0kb upstream 1.0kb upstream 1387 true Chr3: 12167767-12169153 Arabidopsis thaliana
AT3G30580 1.0kb upstream 1.0kb upstream 1000 false Chr3: 12168154-12169153 Arabidopsis thaliana
AT3G30580 1.0kb downstream 1.0kb downstream 1387 true Chr3: 12166767-12168153 Arabidopsis thaliana
AT3G30580 1.0kb downstream 1.0kb downstream 1000 false Chr3: 12166767-12167766 Arabidopsis thaliana
AT3G30580 2.0kb upstream 2.0kb upstream 2387 true Chr3: 12167767-12170153 Arabidopsis thaliana
AT3G30580 2.0kb upstream 2.0kb upstream 2000 false Chr3: 12168154-12170153 Arabidopsis thaliana
AT3G30580 2.0kb downstream 2.0kb downstream 2387 true Chr3: 12165767-12168153 Arabidopsis thaliana
AT3G30580 2.0kb downstream 2.0kb downstream 2000 false Chr3: 12165767-12167766 Arabidopsis thaliana
AT3G30580 5.0kb upstream 5.0kb upstream 5387 true Chr3: 12167767-12173153 Arabidopsis thaliana
AT3G30580 5.0kb upstream 5.0kb upstream 5000 false Chr3: 12168154-12173153 Arabidopsis thaliana
AT3G30580 5.0kb downstream 5.0kb downstream 5387 true Chr3: 12162767-12168153 Arabidopsis thaliana
AT3G30580 5.0kb downstream 5.0kb downstream 5000 false Chr3: 12162767-12167766 Arabidopsis thaliana
AT3G30580 10.0kb upstream 10.0kb upstream 10387 true Chr3: 12167767-12178153 Arabidopsis thaliana
AT3G30580 10.0kb upstream 10.0kb upstream 10000 false Chr3: 12168154-12178153 Arabidopsis thaliana
AT3G30580 10.0kb downstream 10.0kb downstream 10387 true Chr3: 12157767-12168153 Arabidopsis thaliana
AT3G30580 10.0kb downstream 10.0kb downstream 10000 false Chr3: 12157767-12167766 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028773 5273 Angiosperm View MSA
122378358 5261 Brassicaceae View MSA
123837306 5264 Brassicales-Malvales View MSA
124345740 5266 SBM View MSA
124251694 5268 Malvidae View MSA
124062684 5270 Rosid View MSA
123745811 5271 Pentapetalae View MSA
122796444 5272 Eudicot View MSA
121298217 5274 Embryophyte View MSA
123336203 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.267     Low  
cufflinks 0.196     Low  
cufflinks 0.374        
cufflinks 0.988       High
cufflinks 0.183     Low  
cufflinks 1.022       High

0 Strain