Gene : AT3G29170 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15664//PTHR15664:SF3 - C20ORF30 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3097
Name:  ? AT3G29170 Secondary Identifier:  ? PAC:19661646
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G29170 0.5kb upstream 0.5kb upstream 2344 true Chr3: 11136006-11138349 Arabidopsis thaliana
AT3G29170 0.5kb upstream 0.5kb upstream 500 false Chr3: 11137850-11138349 Arabidopsis thaliana
AT3G29170 0.5kb downstream 0.5kb downstream 2344 true Chr3: 11135506-11137849 Arabidopsis thaliana
AT3G29170 0.5kb downstream 0.5kb downstream 500 false Chr3: 11135506-11136005 Arabidopsis thaliana
AT3G29170 1.0kb upstream 1.0kb upstream 2844 true Chr3: 11136006-11138849 Arabidopsis thaliana
AT3G29170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 11137850-11138849 Arabidopsis thaliana
AT3G29170 1.0kb downstream 1.0kb downstream 2844 true Chr3: 11135006-11137849 Arabidopsis thaliana
AT3G29170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 11135006-11136005 Arabidopsis thaliana
AT3G29170 2.0kb upstream 2.0kb upstream 3844 true Chr3: 11136006-11139849 Arabidopsis thaliana
AT3G29170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 11137850-11139849 Arabidopsis thaliana
AT3G29170 2.0kb downstream 2.0kb downstream 3844 true Chr3: 11134006-11137849 Arabidopsis thaliana
AT3G29170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 11134006-11136005 Arabidopsis thaliana
AT3G29170 5.0kb upstream 5.0kb upstream 6844 true Chr3: 11136006-11142849 Arabidopsis thaliana
AT3G29170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 11137850-11142849 Arabidopsis thaliana
AT3G29170 5.0kb downstream 5.0kb downstream 6844 true Chr3: 11131006-11137849 Arabidopsis thaliana
AT3G29170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 11131006-11136005 Arabidopsis thaliana
AT3G29170 10.0kb upstream 10.0kb upstream 11844 true Chr3: 11136006-11147849 Arabidopsis thaliana
AT3G29170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 11137850-11147849 Arabidopsis thaliana
AT3G29170 10.0kb downstream 10.0kb downstream 11844 true Chr3: 11126006-11137849 Arabidopsis thaliana
AT3G29170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 11126006-11136005 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369233 5261 Brassicaceae View MSA
123832302 5264 Brassicales-Malvales View MSA
124321792 5266 SBM View MSA
124251033 5268 Malvidae View MSA
124050420 5270 Rosid View MSA
123747758 5271 Pentapetalae View MSA
122788490 5272 Eudicot View MSA
122042918 5273 Angiosperm View MSA
121351470 5274 Embryophyte View MSA
123427818 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.761        
cufflinks 10.455        
cufflinks 6.712       Low
cufflinks 9.405        
cufflinks 7.389        
cufflinks 11.106       High

0 Strain