Gene : AT3G28760 A. thaliana TAIR10
Defline:  (1 of 1) 1.4.1.24 - 3-dehydroquinate synthase II / DHQ synthase II Genomic Order:  3046
Name:  ? AT3G28760 Secondary Identifier:  ? PAC:19663438
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28760 0.5kb upstream 0.5kb upstream 2858 true Chr3: 10792955-10795812 Arabidopsis thaliana
AT3G28760 0.5kb upstream 0.5kb upstream 500 false Chr3: 10795313-10795812 Arabidopsis thaliana
AT3G28760 0.5kb downstream 0.5kb downstream 2858 true Chr3: 10792455-10795312 Arabidopsis thaliana
AT3G28760 0.5kb downstream 0.5kb downstream 500 false Chr3: 10792455-10792954 Arabidopsis thaliana
AT3G28760 1.0kb upstream 1.0kb upstream 3358 true Chr3: 10792955-10796312 Arabidopsis thaliana
AT3G28760 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10795313-10796312 Arabidopsis thaliana
AT3G28760 1.0kb downstream 1.0kb downstream 3358 true Chr3: 10791955-10795312 Arabidopsis thaliana
AT3G28760 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10791955-10792954 Arabidopsis thaliana
AT3G28760 2.0kb upstream 2.0kb upstream 4358 true Chr3: 10792955-10797312 Arabidopsis thaliana
AT3G28760 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10795313-10797312 Arabidopsis thaliana
AT3G28760 2.0kb downstream 2.0kb downstream 4358 true Chr3: 10790955-10795312 Arabidopsis thaliana
AT3G28760 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10790955-10792954 Arabidopsis thaliana
AT3G28760 5.0kb upstream 5.0kb upstream 7358 true Chr3: 10792955-10800312 Arabidopsis thaliana
AT3G28760 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10795313-10800312 Arabidopsis thaliana
AT3G28760 5.0kb downstream 5.0kb downstream 7358 true Chr3: 10787955-10795312 Arabidopsis thaliana
AT3G28760 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10787955-10792954 Arabidopsis thaliana
AT3G28760 10.0kb upstream 10.0kb upstream 12358 true Chr3: 10792955-10805312 Arabidopsis thaliana
AT3G28760 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10795313-10805312 Arabidopsis thaliana
AT3G28760 10.0kb downstream 10.0kb downstream 12358 true Chr3: 10782955-10795312 Arabidopsis thaliana
AT3G28760 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10782955-10792954 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377428 5261 Brassicaceae View MSA
123828260 5264 Brassicales-Malvales View MSA
124321521 5266 SBM View MSA
124244504 5268 Malvidae View MSA
124061503 5270 Rosid View MSA
123737168 5271 Pentapetalae View MSA
122788177 5272 Eudicot View MSA
122045215 5273 Angiosperm View MSA
121347286 5274 Embryophyte View MSA
123427412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.426       High
cufflinks 1.973        
cufflinks 3.191        
cufflinks 1.958        
cufflinks 2.946        
cufflinks 1.892        

0 Strain