Gene : AT3G28230 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13237:SF8 - SOMETHING ABOUT SILENCING PROTEIN 10 Genomic Order:  2988
Name:  ? AT3G28230 Secondary Identifier:  ? PAC:19661972
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G28230 0.5kb upstream 0.5kb upstream 1485 true Chr3: 10528715-10530199 Arabidopsis thaliana
AT3G28230 0.5kb upstream 0.5kb upstream 500 false Chr3: 10528715-10529214 Arabidopsis thaliana
AT3G28230 0.5kb downstream 0.5kb downstream 1485 true Chr3: 10529215-10530699 Arabidopsis thaliana
AT3G28230 0.5kb downstream 0.5kb downstream 500 false Chr3: 10530200-10530699 Arabidopsis thaliana
AT3G28230 1.0kb upstream 1.0kb upstream 1985 true Chr3: 10528215-10530199 Arabidopsis thaliana
AT3G28230 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10528215-10529214 Arabidopsis thaliana
AT3G28230 1.0kb downstream 1.0kb downstream 1985 true Chr3: 10529215-10531199 Arabidopsis thaliana
AT3G28230 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10530200-10531199 Arabidopsis thaliana
AT3G28230 2.0kb upstream 2.0kb upstream 2985 true Chr3: 10527215-10530199 Arabidopsis thaliana
AT3G28230 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10527215-10529214 Arabidopsis thaliana
AT3G28230 2.0kb downstream 2.0kb downstream 2985 true Chr3: 10529215-10532199 Arabidopsis thaliana
AT3G28230 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10530200-10532199 Arabidopsis thaliana
AT3G28230 5.0kb upstream 5.0kb upstream 5985 true Chr3: 10524215-10530199 Arabidopsis thaliana
AT3G28230 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10524215-10529214 Arabidopsis thaliana
AT3G28230 5.0kb downstream 5.0kb downstream 5985 true Chr3: 10529215-10535199 Arabidopsis thaliana
AT3G28230 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10530200-10535199 Arabidopsis thaliana
AT3G28230 10.0kb upstream 10.0kb upstream 10985 true Chr3: 10519215-10530199 Arabidopsis thaliana
AT3G28230 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10519215-10529214 Arabidopsis thaliana
AT3G28230 10.0kb downstream 10.0kb downstream 10985 true Chr3: 10529215-10540199 Arabidopsis thaliana
AT3G28230 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10530200-10540199 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332095 5261 Brassicaceae View MSA
123773204 5264 Brassicales-Malvales View MSA
124271699 5266 SBM View MSA
124245224 5268 Malvidae View MSA
124037354 5270 Rosid View MSA
123610292 5271 Pentapetalae View MSA
122644917 5272 Eudicot View MSA
122049792 5273 Angiosperm View MSA
121311590 5274 Embryophyte View MSA
123348866 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain