Gene : RPL12-A A. thaliana TAIR10
Primary Identifier:  ? AT3G27830 Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL)
Genomic Order:  2943 Name:  ? AT3G27830
Secondary Identifier:  ? PAC:19662333
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27830 0.5kb upstream 0.5kb upstream 1428 true Chr3: 10318005-10319432 Arabidopsis thaliana
AT3G27830 0.5kb upstream 0.5kb upstream 500 false Chr3: 10318005-10318504 Arabidopsis thaliana
AT3G27830 0.5kb downstream 0.5kb downstream 1428 true Chr3: 10318505-10319932 Arabidopsis thaliana
AT3G27830 0.5kb downstream 0.5kb downstream 500 false Chr3: 10319433-10319932 Arabidopsis thaliana
AT3G27830 1.0kb upstream 1.0kb upstream 1928 true Chr3: 10317505-10319432 Arabidopsis thaliana
AT3G27830 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10317505-10318504 Arabidopsis thaliana
AT3G27830 1.0kb downstream 1.0kb downstream 1928 true Chr3: 10318505-10320432 Arabidopsis thaliana
AT3G27830 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10319433-10320432 Arabidopsis thaliana
AT3G27830 2.0kb upstream 2.0kb upstream 2928 true Chr3: 10316505-10319432 Arabidopsis thaliana
AT3G27830 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10316505-10318504 Arabidopsis thaliana
AT3G27830 2.0kb downstream 2.0kb downstream 2928 true Chr3: 10318505-10321432 Arabidopsis thaliana
AT3G27830 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10319433-10321432 Arabidopsis thaliana
AT3G27830 5.0kb upstream 5.0kb upstream 5928 true Chr3: 10313505-10319432 Arabidopsis thaliana
AT3G27830 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10313505-10318504 Arabidopsis thaliana
AT3G27830 5.0kb downstream 5.0kb downstream 5928 true Chr3: 10318505-10324432 Arabidopsis thaliana
AT3G27830 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10319433-10324432 Arabidopsis thaliana
AT3G27830 10.0kb upstream 10.0kb upstream 10928 true Chr3: 10308505-10319432 Arabidopsis thaliana
AT3G27830 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10308505-10318504 Arabidopsis thaliana
AT3G27830 10.0kb downstream 10.0kb downstream 10928 true Chr3: 10318505-10329432 Arabidopsis thaliana
AT3G27830 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10319433-10329432 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375266 5261 Brassicaceae View MSA
123838796 5264 Brassicales-Malvales View MSA
124350478 5266 SBM View MSA
124242481 5268 Malvidae View MSA
124063045 5270 Rosid View MSA
123741496 5271 Pentapetalae View MSA
122791923 5272 Eudicot View MSA
122049656 5273 Angiosperm View MSA
121351043 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 283.016     High  
cufflinks 15.611        
cufflinks 367.56     High High
cufflinks 15.714        
cufflinks 276.549     High  
cufflinks 15.967        

0 Strain