Gene : AT3G27610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31285:SF0 - PROMOTER OF FILAMENTATION PROTEIN 1 Genomic Order:  2922
Name:  ? AT3G27610 Secondary Identifier:  ? PAC:19665222
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27610 0.5kb upstream 0.5kb upstream 3168 true Chr3: 10225525-10228692 Arabidopsis thaliana
AT3G27610 0.5kb upstream 0.5kb upstream 500 false Chr3: 10228193-10228692 Arabidopsis thaliana
AT3G27610 0.5kb downstream 0.5kb downstream 3168 true Chr3: 10225025-10228192 Arabidopsis thaliana
AT3G27610 0.5kb downstream 0.5kb downstream 500 false Chr3: 10225025-10225524 Arabidopsis thaliana
AT3G27610 1.0kb upstream 1.0kb upstream 3668 true Chr3: 10225525-10229192 Arabidopsis thaliana
AT3G27610 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10228193-10229192 Arabidopsis thaliana
AT3G27610 1.0kb downstream 1.0kb downstream 3668 true Chr3: 10224525-10228192 Arabidopsis thaliana
AT3G27610 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10224525-10225524 Arabidopsis thaliana
AT3G27610 2.0kb upstream 2.0kb upstream 4668 true Chr3: 10225525-10230192 Arabidopsis thaliana
AT3G27610 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10228193-10230192 Arabidopsis thaliana
AT3G27610 2.0kb downstream 2.0kb downstream 4668 true Chr3: 10223525-10228192 Arabidopsis thaliana
AT3G27610 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10223525-10225524 Arabidopsis thaliana
AT3G27610 5.0kb upstream 5.0kb upstream 7668 true Chr3: 10225525-10233192 Arabidopsis thaliana
AT3G27610 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10228193-10233192 Arabidopsis thaliana
AT3G27610 5.0kb downstream 5.0kb downstream 7668 true Chr3: 10220525-10228192 Arabidopsis thaliana
AT3G27610 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10220525-10225524 Arabidopsis thaliana
AT3G27610 10.0kb upstream 10.0kb upstream 12668 true Chr3: 10225525-10238192 Arabidopsis thaliana
AT3G27610 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10228193-10238192 Arabidopsis thaliana
AT3G27610 10.0kb downstream 10.0kb downstream 12668 true Chr3: 10215525-10228192 Arabidopsis thaliana
AT3G27610 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10215525-10225524 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370163 5261 Brassicaceae View MSA
123830198 5264 Brassicales-Malvales View MSA
124346526 5266 SBM View MSA
124243037 5268 Malvidae View MSA
124066208 5270 Rosid View MSA
123737916 5271 Pentapetalae View MSA
122789184 5272 Eudicot View MSA
122047029 5273 Angiosperm View MSA
121345024 5274 Embryophyte View MSA
123425109 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.197        
cufflinks 4.365       High
cufflinks 2.707       Low
cufflinks 4.211       High
cufflinks 2.901        
cufflinks 3.319        

0 Strain