Gene : RPL12-C A. thaliana TAIR10
Primary Identifier:  ? AT3G27850 Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL)
Genomic Order:  2947 Name:  ? AT3G27850
Secondary Identifier:  ? PAC:19663549
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27850 0.5kb upstream 0.5kb upstream 1375 true Chr3: 10324339-10325713 Arabidopsis thaliana
AT3G27850 0.5kb upstream 0.5kb upstream 500 false Chr3: 10324339-10324838 Arabidopsis thaliana
AT3G27850 0.5kb downstream 0.5kb downstream 1375 true Chr3: 10324839-10326213 Arabidopsis thaliana
AT3G27850 0.5kb downstream 0.5kb downstream 500 false Chr3: 10325714-10326213 Arabidopsis thaliana
AT3G27850 1.0kb upstream 1.0kb upstream 1875 true Chr3: 10323839-10325713 Arabidopsis thaliana
AT3G27850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10323839-10324838 Arabidopsis thaliana
AT3G27850 1.0kb downstream 1.0kb downstream 1875 true Chr3: 10324839-10326713 Arabidopsis thaliana
AT3G27850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10325714-10326713 Arabidopsis thaliana
AT3G27850 2.0kb upstream 2.0kb upstream 2875 true Chr3: 10322839-10325713 Arabidopsis thaliana
AT3G27850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10322839-10324838 Arabidopsis thaliana
AT3G27850 2.0kb downstream 2.0kb downstream 2875 true Chr3: 10324839-10327713 Arabidopsis thaliana
AT3G27850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10325714-10327713 Arabidopsis thaliana
AT3G27850 5.0kb upstream 5.0kb upstream 5875 true Chr3: 10319839-10325713 Arabidopsis thaliana
AT3G27850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10319839-10324838 Arabidopsis thaliana
AT3G27850 5.0kb downstream 5.0kb downstream 5875 true Chr3: 10324839-10330713 Arabidopsis thaliana
AT3G27850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10325714-10330713 Arabidopsis thaliana
AT3G27850 10.0kb upstream 10.0kb upstream 10875 true Chr3: 10314839-10325713 Arabidopsis thaliana
AT3G27850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10314839-10324838 Arabidopsis thaliana
AT3G27850 10.0kb downstream 10.0kb downstream 10875 true Chr3: 10324839-10335713 Arabidopsis thaliana
AT3G27850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10325714-10335713 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372696 5261 Brassicaceae View MSA
123838796 5264 Brassicales-Malvales View MSA
124350478 5266 SBM View MSA
124242481 5268 Malvidae View MSA
124063045 5270 Rosid View MSA
123741496 5271 Pentapetalae View MSA
122791923 5272 Eudicot View MSA
122049656 5273 Angiosperm View MSA
121351043 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 316.353     High  
cufflinks 15.86        
cufflinks 410.805     High High
cufflinks 14.126        
cufflinks 280.743     High  
cufflinks 13.297        

0 Strain