Gene : AT3G27520 A. thaliana TAIR10
Genomic Order:  2913 Name:  ? AT3G27520
Secondary Identifier:  ? PAC:19661451
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27520 0.5kb upstream 0.5kb upstream 1578 true Chr3: 10191922-10193499 Arabidopsis thaliana
AT3G27520 0.5kb upstream 0.5kb upstream 500 false Chr3: 10191922-10192421 Arabidopsis thaliana
AT3G27520 0.5kb downstream 0.5kb downstream 1578 true Chr3: 10192422-10193999 Arabidopsis thaliana
AT3G27520 0.5kb downstream 0.5kb downstream 500 false Chr3: 10193500-10193999 Arabidopsis thaliana
AT3G27520 1.0kb upstream 1.0kb upstream 2078 true Chr3: 10191422-10193499 Arabidopsis thaliana
AT3G27520 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10191422-10192421 Arabidopsis thaliana
AT3G27520 1.0kb downstream 1.0kb downstream 2078 true Chr3: 10192422-10194499 Arabidopsis thaliana
AT3G27520 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10193500-10194499 Arabidopsis thaliana
AT3G27520 2.0kb upstream 2.0kb upstream 3078 true Chr3: 10190422-10193499 Arabidopsis thaliana
AT3G27520 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10190422-10192421 Arabidopsis thaliana
AT3G27520 2.0kb downstream 2.0kb downstream 3078 true Chr3: 10192422-10195499 Arabidopsis thaliana
AT3G27520 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10193500-10195499 Arabidopsis thaliana
AT3G27520 5.0kb upstream 5.0kb upstream 6078 true Chr3: 10187422-10193499 Arabidopsis thaliana
AT3G27520 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10187422-10192421 Arabidopsis thaliana
AT3G27520 5.0kb downstream 5.0kb downstream 6078 true Chr3: 10192422-10198499 Arabidopsis thaliana
AT3G27520 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10193500-10198499 Arabidopsis thaliana
AT3G27520 10.0kb upstream 10.0kb upstream 11078 true Chr3: 10182422-10193499 Arabidopsis thaliana
AT3G27520 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10182422-10192421 Arabidopsis thaliana
AT3G27520 10.0kb downstream 10.0kb downstream 11078 true Chr3: 10192422-10203499 Arabidopsis thaliana
AT3G27520 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10193500-10203499 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365688 5261 Brassicaceae View MSA
123840270 5264 Brassicales-Malvales View MSA
124339639 5266 SBM View MSA
124239820 5268 Malvidae View MSA
124060553 5270 Rosid View MSA
123741817 5271 Pentapetalae View MSA
122786659 5272 Eudicot View MSA
122043183 5273 Angiosperm View MSA
121310085 5274 Embryophyte View MSA
123347672 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.933        
cufflinks 6.277        
cufflinks 2.504       Low
cufflinks 6.778        
cufflinks 2.275       Low
cufflinks 6.909        

0 Strain