Gene : RPL12-B A. thaliana TAIR10

Primary Identifier:  ? AT3G27840 Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL)
Genomic Order:  2946 Name:  ? AT3G27840
Secondary Identifier:  ? PAC:19660508

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27840 0.5kb upstream 0.5kb upstream 1097 true Chr3: 10322854-10323950 Arabidopsis thaliana
AT3G27840 0.5kb upstream 0.5kb upstream 500 false Chr3: 10322854-10323353 Arabidopsis thaliana
AT3G27840 0.5kb downstream 0.5kb downstream 1097 true Chr3: 10323354-10324450 Arabidopsis thaliana
AT3G27840 0.5kb downstream 0.5kb downstream 500 false Chr3: 10323951-10324450 Arabidopsis thaliana
AT3G27840 1.0kb upstream 1.0kb upstream 1597 true Chr3: 10322354-10323950 Arabidopsis thaliana
AT3G27840 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10322354-10323353 Arabidopsis thaliana
AT3G27840 1.0kb downstream 1.0kb downstream 1597 true Chr3: 10323354-10324950 Arabidopsis thaliana
AT3G27840 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10323951-10324950 Arabidopsis thaliana
AT3G27840 2.0kb upstream 2.0kb upstream 2597 true Chr3: 10321354-10323950 Arabidopsis thaliana
AT3G27840 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10321354-10323353 Arabidopsis thaliana
AT3G27840 2.0kb downstream 2.0kb downstream 2597 true Chr3: 10323354-10325950 Arabidopsis thaliana
AT3G27840 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10323951-10325950 Arabidopsis thaliana
AT3G27840 5.0kb upstream 5.0kb upstream 5597 true Chr3: 10318354-10323950 Arabidopsis thaliana
AT3G27840 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10318354-10323353 Arabidopsis thaliana
AT3G27840 5.0kb downstream 5.0kb downstream 5597 true Chr3: 10323354-10328950 Arabidopsis thaliana
AT3G27840 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10323951-10328950 Arabidopsis thaliana
AT3G27840 10.0kb upstream 10.0kb upstream 10597 true Chr3: 10313354-10323950 Arabidopsis thaliana
AT3G27840 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10313354-10323353 Arabidopsis thaliana
AT3G27840 10.0kb downstream 10.0kb downstream 10597 true Chr3: 10323354-10333950 Arabidopsis thaliana
AT3G27840 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10323951-10333950 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331907 5261 Brassicaceae View MSA
123773033 5264 Brassicales-Malvales View MSA
124271537 5266 SBM View MSA
124127513 5268 Malvidae View MSA
123856356 5270 Rosid View MSA
123741496 5271 Pentapetalae View MSA
122791923 5272 Eudicot View MSA
122049656 5273 Angiosperm View MSA
121351043 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain