Gene : AT3G27860 A. thaliana TAIR10
Defline:  (1 of 4) PTHR10688//PTHR10688:SF1 - PWWP DOMAIN-CONTAINING PROTEIN // F22F7.12 PROTEIN-RELATED Genomic Order:  2948
Name:  ? AT3G27860 Secondary Identifier:  ? PAC:19660594
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27860 0.5kb upstream 0.5kb upstream 2459 true Chr3: 10325628-10328086 Arabidopsis thaliana
AT3G27860 0.5kb upstream 0.5kb upstream 500 false Chr3: 10325628-10326127 Arabidopsis thaliana
AT3G27860 0.5kb downstream 0.5kb downstream 2459 true Chr3: 10326128-10328586 Arabidopsis thaliana
AT3G27860 0.5kb downstream 0.5kb downstream 500 false Chr3: 10328087-10328586 Arabidopsis thaliana
AT3G27860 1.0kb upstream 1.0kb upstream 2959 true Chr3: 10325128-10328086 Arabidopsis thaliana
AT3G27860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10325128-10326127 Arabidopsis thaliana
AT3G27860 1.0kb downstream 1.0kb downstream 2959 true Chr3: 10326128-10329086 Arabidopsis thaliana
AT3G27860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10328087-10329086 Arabidopsis thaliana
AT3G27860 2.0kb upstream 2.0kb upstream 3959 true Chr3: 10324128-10328086 Arabidopsis thaliana
AT3G27860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10324128-10326127 Arabidopsis thaliana
AT3G27860 2.0kb downstream 2.0kb downstream 3959 true Chr3: 10326128-10330086 Arabidopsis thaliana
AT3G27860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10328087-10330086 Arabidopsis thaliana
AT3G27860 5.0kb upstream 5.0kb upstream 6959 true Chr3: 10321128-10328086 Arabidopsis thaliana
AT3G27860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10321128-10326127 Arabidopsis thaliana
AT3G27860 5.0kb downstream 5.0kb downstream 6959 true Chr3: 10326128-10333086 Arabidopsis thaliana
AT3G27860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10328087-10333086 Arabidopsis thaliana
AT3G27860 10.0kb upstream 10.0kb upstream 11959 true Chr3: 10316128-10328086 Arabidopsis thaliana
AT3G27860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10316128-10326127 Arabidopsis thaliana
AT3G27860 10.0kb downstream 10.0kb downstream 11959 true Chr3: 10326128-10338086 Arabidopsis thaliana
AT3G27860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10328087-10338086 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375787 5261 Brassicaceae View MSA
123801056 5264 Brassicales-Malvales View MSA
124298400 5266 SBM View MSA
124150052 5268 Malvidae View MSA
124072008 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.514        
cufflinks 0.139     Low  
cufflinks 0.659       High
cufflinks 0.195     Low  
cufflinks 0.314        
cufflinks 0.131     Low Low

0 Strain