Gene : PBB1 A. thaliana TAIR10
Primary Identifier:  ? AT3G27430 Defline:  (1 of 2) K02739 - 20S proteasome subunit beta 2 (PSMB7)
Genomic Order:  2903 Name:  ? AT3G27430
Secondary Identifier:  ? PAC:19660822
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27430 0.5kb upstream 0.5kb upstream 3364 true Chr3: 10151979-10155342 Arabidopsis thaliana
AT3G27430 0.5kb upstream 0.5kb upstream 500 false Chr3: 10151979-10152478 Arabidopsis thaliana
AT3G27430 0.5kb downstream 0.5kb downstream 3364 true Chr3: 10152479-10155842 Arabidopsis thaliana
AT3G27430 0.5kb downstream 0.5kb downstream 500 false Chr3: 10155343-10155842 Arabidopsis thaliana
AT3G27430 1.0kb upstream 1.0kb upstream 3864 true Chr3: 10151479-10155342 Arabidopsis thaliana
AT3G27430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10151479-10152478 Arabidopsis thaliana
AT3G27430 1.0kb downstream 1.0kb downstream 3864 true Chr3: 10152479-10156342 Arabidopsis thaliana
AT3G27430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10155343-10156342 Arabidopsis thaliana
AT3G27430 2.0kb upstream 2.0kb upstream 4864 true Chr3: 10150479-10155342 Arabidopsis thaliana
AT3G27430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10150479-10152478 Arabidopsis thaliana
AT3G27430 2.0kb downstream 2.0kb downstream 4864 true Chr3: 10152479-10157342 Arabidopsis thaliana
AT3G27430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10155343-10157342 Arabidopsis thaliana
AT3G27430 5.0kb upstream 5.0kb upstream 7864 true Chr3: 10147479-10155342 Arabidopsis thaliana
AT3G27430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10147479-10152478 Arabidopsis thaliana
AT3G27430 5.0kb downstream 5.0kb downstream 7864 true Chr3: 10152479-10160342 Arabidopsis thaliana
AT3G27430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10155343-10160342 Arabidopsis thaliana
AT3G27430 10.0kb upstream 10.0kb upstream 12864 true Chr3: 10142479-10155342 Arabidopsis thaliana
AT3G27430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10142479-10152478 Arabidopsis thaliana
AT3G27430 10.0kb downstream 10.0kb downstream 12864 true Chr3: 10152479-10165342 Arabidopsis thaliana
AT3G27430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10155343-10165342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379036 5261 Brassicaceae View MSA
123835815 5264 Brassicales-Malvales View MSA
124339943 5266 SBM View MSA
124250164 5268 Malvidae View MSA
124068414 5270 Rosid View MSA
123741626 5271 Pentapetalae View MSA
122791529 5272 Eudicot View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.726        
cufflinks 10.421        
cufflinks 8.012       Low
cufflinks 10.603        
cufflinks 8.862        
cufflinks 11.808       High

0 Strain