Gene : RFC3 A. thaliana TAIR10
Primary Identifier:  ? AT3G17170 Defline:  (1 of 1) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 // SUBFAMILY NOT NAMED
Genomic Order:  1766 Name:  ? AT3G17170
Secondary Identifier:  ? PAC:19665046
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17170 0.5kb upstream 0.5kb upstream 2348 true Chr3: 5853059-5855406 Arabidopsis thaliana
AT3G17170 0.5kb upstream 0.5kb upstream 500 false Chr3: 5854907-5855406 Arabidopsis thaliana
AT3G17170 0.5kb downstream 0.5kb downstream 2348 true Chr3: 5852559-5854906 Arabidopsis thaliana
AT3G17170 0.5kb downstream 0.5kb downstream 500 false Chr3: 5852559-5853058 Arabidopsis thaliana
AT3G17170 1.0kb upstream 1.0kb upstream 2848 true Chr3: 5853059-5855906 Arabidopsis thaliana
AT3G17170 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5854907-5855906 Arabidopsis thaliana
AT3G17170 1.0kb downstream 1.0kb downstream 2848 true Chr3: 5852059-5854906 Arabidopsis thaliana
AT3G17170 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5852059-5853058 Arabidopsis thaliana
AT3G17170 2.0kb upstream 2.0kb upstream 3848 true Chr3: 5853059-5856906 Arabidopsis thaliana
AT3G17170 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5854907-5856906 Arabidopsis thaliana
AT3G17170 2.0kb downstream 2.0kb downstream 3848 true Chr3: 5851059-5854906 Arabidopsis thaliana
AT3G17170 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5851059-5853058 Arabidopsis thaliana
AT3G17170 5.0kb upstream 5.0kb upstream 6848 true Chr3: 5853059-5859906 Arabidopsis thaliana
AT3G17170 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5854907-5859906 Arabidopsis thaliana
AT3G17170 5.0kb downstream 5.0kb downstream 6848 true Chr3: 5848059-5854906 Arabidopsis thaliana
AT3G17170 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5848059-5853058 Arabidopsis thaliana
AT3G17170 10.0kb upstream 10.0kb upstream 11848 true Chr3: 5853059-5864906 Arabidopsis thaliana
AT3G17170 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5854907-5864906 Arabidopsis thaliana
AT3G17170 10.0kb downstream 10.0kb downstream 11848 true Chr3: 5843059-5854906 Arabidopsis thaliana
AT3G17170 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5843059-5853058 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360530 5261 Brassicaceae View MSA
123832306 5264 Brassicales-Malvales View MSA
124343873 5266 SBM View MSA
124237653 5268 Malvidae View MSA
124066561 5270 Rosid View MSA
123738958 5271 Pentapetalae View MSA
122791787 5272 Eudicot View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.46     High High
cufflinks 3.881        
cufflinks 27.892     High  
cufflinks 3.974        
cufflinks 17.077        
cufflinks 4.021        

0 Strain