Gene : mtLPD2 A. thaliana TAIR10
Primary Identifier:  ? AT3G17240 Defline:  (1 of 2) 1.2.1.25//1.8.1.4 - 2-oxoisovalerate dehydrogenase (acylating) // Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase
Genomic Order:  1774 Name:  ? AT3G17240
Secondary Identifier:  ? PAC:19663666
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLYCLEAV-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5046 Arabidopsis thaliana pathologic  
Athaliana PWY-5084 Arabidopsis thaliana pathologic  
Athaliana PWY-5173 Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PYRUVDEHYD-PWY Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17240 0.5kb upstream 0.5kb upstream 2881 true Chr3: 5889872-5892752 Arabidopsis thaliana
AT3G17240 0.5kb upstream 0.5kb upstream 500 false Chr3: 5892253-5892752 Arabidopsis thaliana
AT3G17240 0.5kb downstream 0.5kb downstream 2881 true Chr3: 5889372-5892252 Arabidopsis thaliana
AT3G17240 0.5kb downstream 0.5kb downstream 500 false Chr3: 5889372-5889871 Arabidopsis thaliana
AT3G17240 1.0kb upstream 1.0kb upstream 3381 true Chr3: 5889872-5893252 Arabidopsis thaliana
AT3G17240 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5892253-5893252 Arabidopsis thaliana
AT3G17240 1.0kb downstream 1.0kb downstream 3381 true Chr3: 5888872-5892252 Arabidopsis thaliana
AT3G17240 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5888872-5889871 Arabidopsis thaliana
AT3G17240 2.0kb upstream 2.0kb upstream 4381 true Chr3: 5889872-5894252 Arabidopsis thaliana
AT3G17240 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5892253-5894252 Arabidopsis thaliana
AT3G17240 2.0kb downstream 2.0kb downstream 4381 true Chr3: 5887872-5892252 Arabidopsis thaliana
AT3G17240 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5887872-5889871 Arabidopsis thaliana
AT3G17240 5.0kb upstream 5.0kb upstream 7381 true Chr3: 5889872-5897252 Arabidopsis thaliana
AT3G17240 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5892253-5897252 Arabidopsis thaliana
AT3G17240 5.0kb downstream 5.0kb downstream 7381 true Chr3: 5884872-5892252 Arabidopsis thaliana
AT3G17240 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5884872-5889871 Arabidopsis thaliana
AT3G17240 10.0kb upstream 10.0kb upstream 12381 true Chr3: 5889872-5902252 Arabidopsis thaliana
AT3G17240 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5892253-5902252 Arabidopsis thaliana
AT3G17240 10.0kb downstream 10.0kb downstream 12381 true Chr3: 5879872-5892252 Arabidopsis thaliana
AT3G17240 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5879872-5889871 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375274 5261 Brassicaceae View MSA
123836893 5264 Brassicales-Malvales View MSA
124345171 5266 SBM View MSA
124239269 5268 Malvidae View MSA
124063869 5270 Rosid View MSA
123749055 5271 Pentapetalae View MSA
122790901 5272 Eudicot View MSA
122041676 5273 Angiosperm View MSA
121345591 5274 Embryophyte View MSA
123424332 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.544        
cufflinks 28.362        
cufflinks 25.409       Low
cufflinks 32.196     High  
cufflinks 26.94     High  
cufflinks 34.253     High High

0 Strain