Gene : RR1 A. thaliana TAIR10
Primary Identifier:  ? AT3G16857 Defline:  (1 of 2) PTHR26402:SF617 - TWO-COMPONENT RESPONSE REGULATOR ARR1-RELATED
Genomic Order:  1733 Name:  ? AT3G16857
Secondary Identifier:  ? PAC:19660587
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16857 0.5kb upstream 0.5kb upstream 4123 true Chr3: 5755321-5759443 Arabidopsis thaliana
AT3G16857 0.5kb upstream 0.5kb upstream 500 false Chr3: 5755321-5755820 Arabidopsis thaliana
AT3G16857 0.5kb downstream 0.5kb downstream 4123 true Chr3: 5755821-5759943 Arabidopsis thaliana
AT3G16857 0.5kb downstream 0.5kb downstream 500 false Chr3: 5759444-5759943 Arabidopsis thaliana
AT3G16857 1.0kb upstream 1.0kb upstream 4623 true Chr3: 5754821-5759443 Arabidopsis thaliana
AT3G16857 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5754821-5755820 Arabidopsis thaliana
AT3G16857 1.0kb downstream 1.0kb downstream 4623 true Chr3: 5755821-5760443 Arabidopsis thaliana
AT3G16857 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5759444-5760443 Arabidopsis thaliana
AT3G16857 2.0kb upstream 2.0kb upstream 5623 true Chr3: 5753821-5759443 Arabidopsis thaliana
AT3G16857 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5753821-5755820 Arabidopsis thaliana
AT3G16857 2.0kb downstream 2.0kb downstream 5623 true Chr3: 5755821-5761443 Arabidopsis thaliana
AT3G16857 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5759444-5761443 Arabidopsis thaliana
AT3G16857 5.0kb upstream 5.0kb upstream 8623 true Chr3: 5750821-5759443 Arabidopsis thaliana
AT3G16857 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5750821-5755820 Arabidopsis thaliana
AT3G16857 5.0kb downstream 5.0kb downstream 8623 true Chr3: 5755821-5764443 Arabidopsis thaliana
AT3G16857 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5759444-5764443 Arabidopsis thaliana
AT3G16857 10.0kb upstream 10.0kb upstream 13623 true Chr3: 5745821-5759443 Arabidopsis thaliana
AT3G16857 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5745821-5755820 Arabidopsis thaliana
AT3G16857 10.0kb downstream 10.0kb downstream 13623 true Chr3: 5755821-5769443 Arabidopsis thaliana
AT3G16857 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5759444-5769443 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360451 5261 Brassicaceae View MSA
123837338 5264 Brassicales-Malvales View MSA
124344125 5266 SBM View MSA
124241603 5268 Malvidae View MSA
124061733 5270 Rosid View MSA
123739139 5271 Pentapetalae View MSA
122791223 5272 Eudicot View MSA
122048546 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.943        
cufflinks 13.266        
cufflinks 7.396       Low
cufflinks 14.959       High
cufflinks 9.883        
cufflinks 13.452        

0 Strain