Gene : GATA17 A. thaliana TAIR10
Primary Identifier:  ? AT3G16870 Defline:  (1 of 5) PTHR10071:SF203 - GATA TRANSCRIPTION FACTOR 15-RELATED
Genomic Order:  1735 Name:  ? AT3G16870
Secondary Identifier:  ? PAC:19663095
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16870 0.5kb upstream 0.5kb upstream 1569 true Chr3: 5763586-5765154 Arabidopsis thaliana
AT3G16870 0.5kb upstream 0.5kb upstream 500 false Chr3: 5764655-5765154 Arabidopsis thaliana
AT3G16870 0.5kb downstream 0.5kb downstream 1569 true Chr3: 5763086-5764654 Arabidopsis thaliana
AT3G16870 0.5kb downstream 0.5kb downstream 500 false Chr3: 5763086-5763585 Arabidopsis thaliana
AT3G16870 1.0kb upstream 1.0kb upstream 2069 true Chr3: 5763586-5765654 Arabidopsis thaliana
AT3G16870 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5764655-5765654 Arabidopsis thaliana
AT3G16870 1.0kb downstream 1.0kb downstream 2069 true Chr3: 5762586-5764654 Arabidopsis thaliana
AT3G16870 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5762586-5763585 Arabidopsis thaliana
AT3G16870 2.0kb upstream 2.0kb upstream 3069 true Chr3: 5763586-5766654 Arabidopsis thaliana
AT3G16870 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5764655-5766654 Arabidopsis thaliana
AT3G16870 2.0kb downstream 2.0kb downstream 3069 true Chr3: 5761586-5764654 Arabidopsis thaliana
AT3G16870 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5761586-5763585 Arabidopsis thaliana
AT3G16870 5.0kb upstream 5.0kb upstream 6069 true Chr3: 5763586-5769654 Arabidopsis thaliana
AT3G16870 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5764655-5769654 Arabidopsis thaliana
AT3G16870 5.0kb downstream 5.0kb downstream 6069 true Chr3: 5758586-5764654 Arabidopsis thaliana
AT3G16870 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5758586-5763585 Arabidopsis thaliana
AT3G16870 10.0kb upstream 10.0kb upstream 11069 true Chr3: 5763586-5774654 Arabidopsis thaliana
AT3G16870 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5764655-5774654 Arabidopsis thaliana
AT3G16870 10.0kb downstream 10.0kb downstream 11069 true Chr3: 5753586-5764654 Arabidopsis thaliana
AT3G16870 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5753586-5763585 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379121 5261 Brassicaceae View MSA
123802104 5264 Brassicales-Malvales View MSA
124299325 5266 SBM View MSA
124250441 5268 Malvidae View MSA
124071529 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.037        
cufflinks 7.477        
cufflinks 4.115        
cufflinks 8.509        
cufflinks 2.297       Low
cufflinks 11.659       High

0 Strain