Gene : TCTP A. thaliana TAIR10
Primary Identifier:  ? AT3G16640 Defline:  (1 of 2) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED
Genomic Order:  1709 Name:  ? AT3G16640
Secondary Identifier:  ? PAC:19661690
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16640 0.5kb upstream 0.5kb upstream 1970 true Chr3: 5669373-5671342 Arabidopsis thaliana
AT3G16640 0.5kb upstream 0.5kb upstream 500 false Chr3: 5670843-5671342 Arabidopsis thaliana
AT3G16640 0.5kb downstream 0.5kb downstream 1970 true Chr3: 5668873-5670842 Arabidopsis thaliana
AT3G16640 0.5kb downstream 0.5kb downstream 500 false Chr3: 5668873-5669372 Arabidopsis thaliana
AT3G16640 1.0kb upstream 1.0kb upstream 2470 true Chr3: 5669373-5671842 Arabidopsis thaliana
AT3G16640 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5670843-5671842 Arabidopsis thaliana
AT3G16640 1.0kb downstream 1.0kb downstream 2470 true Chr3: 5668373-5670842 Arabidopsis thaliana
AT3G16640 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5668373-5669372 Arabidopsis thaliana
AT3G16640 2.0kb upstream 2.0kb upstream 3470 true Chr3: 5669373-5672842 Arabidopsis thaliana
AT3G16640 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5670843-5672842 Arabidopsis thaliana
AT3G16640 2.0kb downstream 2.0kb downstream 3470 true Chr3: 5667373-5670842 Arabidopsis thaliana
AT3G16640 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5667373-5669372 Arabidopsis thaliana
AT3G16640 5.0kb upstream 5.0kb upstream 6470 true Chr3: 5669373-5675842 Arabidopsis thaliana
AT3G16640 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5670843-5675842 Arabidopsis thaliana
AT3G16640 5.0kb downstream 5.0kb downstream 6470 true Chr3: 5664373-5670842 Arabidopsis thaliana
AT3G16640 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5664373-5669372 Arabidopsis thaliana
AT3G16640 10.0kb upstream 10.0kb upstream 11470 true Chr3: 5669373-5680842 Arabidopsis thaliana
AT3G16640 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5670843-5680842 Arabidopsis thaliana
AT3G16640 10.0kb downstream 10.0kb downstream 11470 true Chr3: 5659373-5670842 Arabidopsis thaliana
AT3G16640 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5659373-5669372 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377842 5261 Brassicaceae View MSA
123839856 5264 Brassicales-Malvales View MSA
124343288 5266 SBM View MSA
124239278 5268 Malvidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 787.54     High  
cufflinks 2145.109     High High
cufflinks 858.326     High  
cufflinks 1920.635     High  
cufflinks 824.725     High  
cufflinks 1851.321     High  

0 Strain