Gene : AT3G16800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13832//PTHR13832:SF310 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 2C 41-RELATED Genomic Order:  1726
Name:  ? AT3G16800 Secondary Identifier:  ? PAC:19660635
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16800 0.5kb upstream 0.5kb upstream 2666 true Chr3: 5720520-5723185 Arabidopsis thaliana
AT3G16800 0.5kb upstream 0.5kb upstream 500 false Chr3: 5720520-5721019 Arabidopsis thaliana
AT3G16800 0.5kb downstream 0.5kb downstream 2666 true Chr3: 5721020-5723685 Arabidopsis thaliana
AT3G16800 0.5kb downstream 0.5kb downstream 500 false Chr3: 5723186-5723685 Arabidopsis thaliana
AT3G16800 1.0kb upstream 1.0kb upstream 3166 true Chr3: 5720020-5723185 Arabidopsis thaliana
AT3G16800 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5720020-5721019 Arabidopsis thaliana
AT3G16800 1.0kb downstream 1.0kb downstream 3166 true Chr3: 5721020-5724185 Arabidopsis thaliana
AT3G16800 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5723186-5724185 Arabidopsis thaliana
AT3G16800 2.0kb upstream 2.0kb upstream 4166 true Chr3: 5719020-5723185 Arabidopsis thaliana
AT3G16800 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5719020-5721019 Arabidopsis thaliana
AT3G16800 2.0kb downstream 2.0kb downstream 4166 true Chr3: 5721020-5725185 Arabidopsis thaliana
AT3G16800 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5723186-5725185 Arabidopsis thaliana
AT3G16800 5.0kb upstream 5.0kb upstream 7166 true Chr3: 5716020-5723185 Arabidopsis thaliana
AT3G16800 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5716020-5721019 Arabidopsis thaliana
AT3G16800 5.0kb downstream 5.0kb downstream 7166 true Chr3: 5721020-5728185 Arabidopsis thaliana
AT3G16800 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5723186-5728185 Arabidopsis thaliana
AT3G16800 10.0kb upstream 10.0kb upstream 12166 true Chr3: 5711020-5723185 Arabidopsis thaliana
AT3G16800 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5711020-5721019 Arabidopsis thaliana
AT3G16800 10.0kb downstream 10.0kb downstream 12166 true Chr3: 5721020-5733185 Arabidopsis thaliana
AT3G16800 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5723186-5733185 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368387 5261 Brassicaceae View MSA
123840208 5264 Brassicales-Malvales View MSA
124349192 5266 SBM View MSA
124246328 5268 Malvidae View MSA
124073402 5270 Rosid View MSA
123757338 5271 Pentapetalae View MSA
122797893 5272 Eudicot View MSA
122041990 5273 Angiosperm View MSA
121309911 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.068        
cufflinks 1.757        
cufflinks 3.242        
cufflinks 3.899       High
cufflinks 2.812        
cufflinks 1.148       Low

0 Strain