Gene : AT3G16550 A. thaliana TAIR10
Defline:  (1 of 13) 3.4.21.107 - Peptidase Do / Protease Do Genomic Order:  1698
Name:  ? AT3G16550 Secondary Identifier:  ? PAC:19663395
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16550 0.5kb upstream 0.5kb upstream 2998 true Chr3: 5629920-5632917 Arabidopsis thaliana
AT3G16550 0.5kb upstream 0.5kb upstream 500 false Chr3: 5632418-5632917 Arabidopsis thaliana
AT3G16550 0.5kb downstream 0.5kb downstream 2998 true Chr3: 5629420-5632417 Arabidopsis thaliana
AT3G16550 0.5kb downstream 0.5kb downstream 500 false Chr3: 5629420-5629919 Arabidopsis thaliana
AT3G16550 1.0kb upstream 1.0kb upstream 3498 true Chr3: 5629920-5633417 Arabidopsis thaliana
AT3G16550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5632418-5633417 Arabidopsis thaliana
AT3G16550 1.0kb downstream 1.0kb downstream 3498 true Chr3: 5628920-5632417 Arabidopsis thaliana
AT3G16550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5628920-5629919 Arabidopsis thaliana
AT3G16550 2.0kb upstream 2.0kb upstream 4498 true Chr3: 5629920-5634417 Arabidopsis thaliana
AT3G16550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5632418-5634417 Arabidopsis thaliana
AT3G16550 2.0kb downstream 2.0kb downstream 4498 true Chr3: 5627920-5632417 Arabidopsis thaliana
AT3G16550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5627920-5629919 Arabidopsis thaliana
AT3G16550 5.0kb upstream 5.0kb upstream 7498 true Chr3: 5629920-5637417 Arabidopsis thaliana
AT3G16550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5632418-5637417 Arabidopsis thaliana
AT3G16550 5.0kb downstream 5.0kb downstream 7498 true Chr3: 5624920-5632417 Arabidopsis thaliana
AT3G16550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5624920-5629919 Arabidopsis thaliana
AT3G16550 10.0kb upstream 10.0kb upstream 12498 true Chr3: 5629920-5642417 Arabidopsis thaliana
AT3G16550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5632418-5642417 Arabidopsis thaliana
AT3G16550 10.0kb downstream 10.0kb downstream 12498 true Chr3: 5619920-5632417 Arabidopsis thaliana
AT3G16550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5619920-5629919 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499792 5273 Angiosperm View MSA
122338676 5261 Brassicaceae View MSA
123779229 5264 Brassicales-Malvales View MSA
124277559 5266 SBM View MSA
124132747 5268 Malvidae View MSA
123861014 5270 Rosid View MSA
123446590 5271 Pentapetalae View MSA
122482139 5272 Eudicot View MSA
120773128 5274 Embryophyte View MSA
122815451 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain