Gene : AT3G16350 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24078:SF169 - DNAJ HOMOLOG SUBFAMILY C MEMBER 17 Genomic Order:  1677
Name:  ? AT3G16350 Secondary Identifier:  ? PAC:19659105
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16350 0.5kb upstream 0.5kb upstream 2443 true Chr3: 5547218-5549660 Arabidopsis thaliana
AT3G16350 0.5kb upstream 0.5kb upstream 500 false Chr3: 5547218-5547717 Arabidopsis thaliana
AT3G16350 0.5kb downstream 0.5kb downstream 2443 true Chr3: 5547718-5550160 Arabidopsis thaliana
AT3G16350 0.5kb downstream 0.5kb downstream 500 false Chr3: 5549661-5550160 Arabidopsis thaliana
AT3G16350 1.0kb upstream 1.0kb upstream 2943 true Chr3: 5546718-5549660 Arabidopsis thaliana
AT3G16350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5546718-5547717 Arabidopsis thaliana
AT3G16350 1.0kb downstream 1.0kb downstream 2943 true Chr3: 5547718-5550660 Arabidopsis thaliana
AT3G16350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5549661-5550660 Arabidopsis thaliana
AT3G16350 2.0kb upstream 2.0kb upstream 3943 true Chr3: 5545718-5549660 Arabidopsis thaliana
AT3G16350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5545718-5547717 Arabidopsis thaliana
AT3G16350 2.0kb downstream 2.0kb downstream 3943 true Chr3: 5547718-5551660 Arabidopsis thaliana
AT3G16350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5549661-5551660 Arabidopsis thaliana
AT3G16350 5.0kb upstream 5.0kb upstream 6943 true Chr3: 5542718-5549660 Arabidopsis thaliana
AT3G16350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5542718-5547717 Arabidopsis thaliana
AT3G16350 5.0kb downstream 5.0kb downstream 6943 true Chr3: 5547718-5554660 Arabidopsis thaliana
AT3G16350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5549661-5554660 Arabidopsis thaliana
AT3G16350 10.0kb upstream 10.0kb upstream 11943 true Chr3: 5537718-5549660 Arabidopsis thaliana
AT3G16350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5537718-5547717 Arabidopsis thaliana
AT3G16350 10.0kb downstream 10.0kb downstream 11943 true Chr3: 5547718-5559660 Arabidopsis thaliana
AT3G16350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5549661-5559660 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362618 5261 Brassicaceae View MSA
123837822 5264 Brassicales-Malvales View MSA
124337721 5266 SBM View MSA
124251294 5268 Malvidae View MSA
124065296 5270 Rosid View MSA
123744920 5271 Pentapetalae View MSA
122787760 5272 Eudicot View MSA
122050347 5273 Angiosperm View MSA
121350990 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.409       Low
cufflinks 8.512       High
cufflinks 2.717        
cufflinks 6.937        
cufflinks 2.857        
cufflinks 7.623        

0 Strain