Gene : AT3G16310 A. thaliana TAIR10
Defline:  (1 of 1) K14313 - nuclear pore complex protein Nup53 (NUP35, NUP53) Genomic Order:  1673
Name:  ? AT3G16310 Secondary Identifier:  ? PAC:19663970
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16310 0.5kb upstream 0.5kb upstream 2689 true Chr3: 5526414-5529102 Arabidopsis thaliana
AT3G16310 0.5kb upstream 0.5kb upstream 500 false Chr3: 5528603-5529102 Arabidopsis thaliana
AT3G16310 0.5kb downstream 0.5kb downstream 2689 true Chr3: 5525914-5528602 Arabidopsis thaliana
AT3G16310 0.5kb downstream 0.5kb downstream 500 false Chr3: 5525914-5526413 Arabidopsis thaliana
AT3G16310 1.0kb upstream 1.0kb upstream 3189 true Chr3: 5526414-5529602 Arabidopsis thaliana
AT3G16310 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5528603-5529602 Arabidopsis thaliana
AT3G16310 1.0kb downstream 1.0kb downstream 3189 true Chr3: 5525414-5528602 Arabidopsis thaliana
AT3G16310 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5525414-5526413 Arabidopsis thaliana
AT3G16310 2.0kb upstream 2.0kb upstream 4189 true Chr3: 5526414-5530602 Arabidopsis thaliana
AT3G16310 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5528603-5530602 Arabidopsis thaliana
AT3G16310 2.0kb downstream 2.0kb downstream 4189 true Chr3: 5524414-5528602 Arabidopsis thaliana
AT3G16310 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5524414-5526413 Arabidopsis thaliana
AT3G16310 5.0kb upstream 5.0kb upstream 7189 true Chr3: 5526414-5533602 Arabidopsis thaliana
AT3G16310 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5528603-5533602 Arabidopsis thaliana
AT3G16310 5.0kb downstream 5.0kb downstream 7189 true Chr3: 5521414-5528602 Arabidopsis thaliana
AT3G16310 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5521414-5526413 Arabidopsis thaliana
AT3G16310 10.0kb upstream 10.0kb upstream 12189 true Chr3: 5526414-5538602 Arabidopsis thaliana
AT3G16310 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5528603-5538602 Arabidopsis thaliana
AT3G16310 10.0kb downstream 10.0kb downstream 12189 true Chr3: 5516414-5528602 Arabidopsis thaliana
AT3G16310 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5516414-5526413 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373612 5261 Brassicaceae View MSA
123828677 5264 Brassicales-Malvales View MSA
124336744 5266 SBM View MSA
124238383 5268 Malvidae View MSA
124060694 5270 Rosid View MSA
123737479 5271 Pentapetalae View MSA
122787374 5272 Eudicot View MSA
122043882 5273 Angiosperm View MSA
121345576 5274 Embryophyte View MSA
123427693 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.222        
cufflinks 22.897        
cufflinks 8.115       Low
cufflinks 23.093        
cufflinks 8.728       Low
cufflinks 20.69        

0 Strain