Gene : JAL31 A. thaliana TAIR10
Primary Identifier:  ? AT3G16430 Defline:  (1 of 39) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED
Genomic Order:  1685 Name:  ? AT3G16430
Secondary Identifier:  ? PAC:19658566
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16430 0.5kb upstream 0.5kb upstream 2025 true Chr3: 5581163-5583187 Arabidopsis thaliana
AT3G16430 0.5kb upstream 0.5kb upstream 500 false Chr3: 5581163-5581662 Arabidopsis thaliana
AT3G16430 0.5kb downstream 0.5kb downstream 2025 true Chr3: 5581663-5583687 Arabidopsis thaliana
AT3G16430 0.5kb downstream 0.5kb downstream 500 false Chr3: 5583188-5583687 Arabidopsis thaliana
AT3G16430 1.0kb upstream 1.0kb upstream 2525 true Chr3: 5580663-5583187 Arabidopsis thaliana
AT3G16430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5580663-5581662 Arabidopsis thaliana
AT3G16430 1.0kb downstream 1.0kb downstream 2525 true Chr3: 5581663-5584187 Arabidopsis thaliana
AT3G16430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5583188-5584187 Arabidopsis thaliana
AT3G16430 2.0kb upstream 2.0kb upstream 3525 true Chr3: 5579663-5583187 Arabidopsis thaliana
AT3G16430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5579663-5581662 Arabidopsis thaliana
AT3G16430 2.0kb downstream 2.0kb downstream 3525 true Chr3: 5581663-5585187 Arabidopsis thaliana
AT3G16430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5583188-5585187 Arabidopsis thaliana
AT3G16430 5.0kb upstream 5.0kb upstream 6525 true Chr3: 5576663-5583187 Arabidopsis thaliana
AT3G16430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5576663-5581662 Arabidopsis thaliana
AT3G16430 5.0kb downstream 5.0kb downstream 6525 true Chr3: 5581663-5588187 Arabidopsis thaliana
AT3G16430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5583188-5588187 Arabidopsis thaliana
AT3G16430 10.0kb upstream 10.0kb upstream 11525 true Chr3: 5571663-5583187 Arabidopsis thaliana
AT3G16430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5571663-5581662 Arabidopsis thaliana
AT3G16430 10.0kb downstream 10.0kb downstream 11525 true Chr3: 5581663-5593187 Arabidopsis thaliana
AT3G16430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5583188-5593187 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379456 5261 Brassicaceae View MSA
123802278 5264 Brassicales-Malvales View MSA
124299487 5266 SBM View MSA
124250079 5268 Malvidae View MSA
124050503 5270 Rosid View MSA
123753130 5271 Pentapetalae View MSA
122797480 5272 Eudicot View MSA
122051624 5273 Angiosperm View MSA
121351046 5274 Embryophyte View MSA
123381988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.151     Low  
cufflinks 38.562     High  
cufflinks 0.177     Low  
cufflinks 41.128     High  
cufflinks 0.156     Low  
cufflinks 29.561     High  

0 Strain