Gene : AT3G16040 A. thaliana TAIR10
Defline:  (1 of 2) KOG4766 - Uncharacterized conserved protein Genomic Order:  1644
Name:  ? AT3G16040 Secondary Identifier:  ? PAC:19661847
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16040 0.5kb upstream 0.5kb upstream 1362 true Chr3: 5442591-5443952 Arabidopsis thaliana
AT3G16040 0.5kb upstream 0.5kb upstream 500 false Chr3: 5442591-5443090 Arabidopsis thaliana
AT3G16040 0.5kb downstream 0.5kb downstream 1362 true Chr3: 5443091-5444452 Arabidopsis thaliana
AT3G16040 0.5kb downstream 0.5kb downstream 500 false Chr3: 5443953-5444452 Arabidopsis thaliana
AT3G16040 1.0kb upstream 1.0kb upstream 1862 true Chr3: 5442091-5443952 Arabidopsis thaliana
AT3G16040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5442091-5443090 Arabidopsis thaliana
AT3G16040 1.0kb downstream 1.0kb downstream 1862 true Chr3: 5443091-5444952 Arabidopsis thaliana
AT3G16040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5443953-5444952 Arabidopsis thaliana
AT3G16040 2.0kb upstream 2.0kb upstream 2862 true Chr3: 5441091-5443952 Arabidopsis thaliana
AT3G16040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5441091-5443090 Arabidopsis thaliana
AT3G16040 2.0kb downstream 2.0kb downstream 2862 true Chr3: 5443091-5445952 Arabidopsis thaliana
AT3G16040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5443953-5445952 Arabidopsis thaliana
AT3G16040 5.0kb upstream 5.0kb upstream 5862 true Chr3: 5438091-5443952 Arabidopsis thaliana
AT3G16040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5438091-5443090 Arabidopsis thaliana
AT3G16040 5.0kb downstream 5.0kb downstream 5862 true Chr3: 5443091-5448952 Arabidopsis thaliana
AT3G16040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5443953-5448952 Arabidopsis thaliana
AT3G16040 10.0kb upstream 10.0kb upstream 10862 true Chr3: 5433091-5443952 Arabidopsis thaliana
AT3G16040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5433091-5443090 Arabidopsis thaliana
AT3G16040 10.0kb downstream 10.0kb downstream 10862 true Chr3: 5443091-5453952 Arabidopsis thaliana
AT3G16040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5443953-5453952 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510608 5273 Angiosperm View MSA
122366032 5261 Brassicaceae View MSA
123799091 5264 Brassicales-Malvales View MSA
124296646 5266 SBM View MSA
124148737 5268 Malvidae View MSA
123874676 5270 Rosid View MSA
123458612 5271 Pentapetalae View MSA
122494014 5272 Eudicot View MSA
120783700 5274 Embryophyte View MSA
122825678 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.114     Low High
cufflinks 0.038     Low  

0 Strain