Gene : RABG3c A. thaliana TAIR10
Primary Identifier:  ? AT3G16100 Defline:  (1 of 2) PTHR24073//PTHR24073:SF502 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABG3D
Genomic Order:  1650 Name:  ? AT3G16100
Secondary Identifier:  ? PAC:19660765
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16100 0.5kb upstream 0.5kb upstream 2119 true Chr3: 5458672-5460790 Arabidopsis thaliana
AT3G16100 0.5kb upstream 0.5kb upstream 500 false Chr3: 5458672-5459171 Arabidopsis thaliana
AT3G16100 0.5kb downstream 0.5kb downstream 2119 true Chr3: 5459172-5461290 Arabidopsis thaliana
AT3G16100 0.5kb downstream 0.5kb downstream 500 false Chr3: 5460791-5461290 Arabidopsis thaliana
AT3G16100 1.0kb upstream 1.0kb upstream 2619 true Chr3: 5458172-5460790 Arabidopsis thaliana
AT3G16100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5458172-5459171 Arabidopsis thaliana
AT3G16100 1.0kb downstream 1.0kb downstream 2619 true Chr3: 5459172-5461790 Arabidopsis thaliana
AT3G16100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5460791-5461790 Arabidopsis thaliana
AT3G16100 2.0kb upstream 2.0kb upstream 3619 true Chr3: 5457172-5460790 Arabidopsis thaliana
AT3G16100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5457172-5459171 Arabidopsis thaliana
AT3G16100 2.0kb downstream 2.0kb downstream 3619 true Chr3: 5459172-5462790 Arabidopsis thaliana
AT3G16100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5460791-5462790 Arabidopsis thaliana
AT3G16100 5.0kb upstream 5.0kb upstream 6619 true Chr3: 5454172-5460790 Arabidopsis thaliana
AT3G16100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5454172-5459171 Arabidopsis thaliana
AT3G16100 5.0kb downstream 5.0kb downstream 6619 true Chr3: 5459172-5465790 Arabidopsis thaliana
AT3G16100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5460791-5465790 Arabidopsis thaliana
AT3G16100 10.0kb upstream 10.0kb upstream 11619 true Chr3: 5449172-5460790 Arabidopsis thaliana
AT3G16100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5449172-5459171 Arabidopsis thaliana
AT3G16100 10.0kb downstream 10.0kb downstream 11619 true Chr3: 5459172-5470790 Arabidopsis thaliana
AT3G16100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5460791-5470790 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375457 5261 Brassicaceae View MSA
123837674 5264 Brassicales-Malvales View MSA
124337885 5266 SBM View MSA
124244922 5268 Malvidae View MSA
124066857 5270 Rosid View MSA
123747351 5271 Pentapetalae View MSA
122788810 5272 Eudicot View MSA
122045905 5273 Angiosperm View MSA
121346139 5274 Embryophyte View MSA
123428256 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.414        
cufflinks 12.223        
cufflinks 13.606       High
cufflinks 12.64        
cufflinks 12.713        
cufflinks 9.881       Low

0 Strain