Gene : AT3G15430 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  1578
Name:  ? AT3G15430 Secondary Identifier:  ? PAC:19663317
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15430 0.5kb upstream 0.5kb upstream 3508 true Chr3: 5208238-5211745 Arabidopsis thaliana
AT3G15430 0.5kb upstream 0.5kb upstream 500 false Chr3: 5208238-5208737 Arabidopsis thaliana
AT3G15430 0.5kb downstream 0.5kb downstream 3508 true Chr3: 5208738-5212245 Arabidopsis thaliana
AT3G15430 0.5kb downstream 0.5kb downstream 500 false Chr3: 5211746-5212245 Arabidopsis thaliana
AT3G15430 1.0kb upstream 1.0kb upstream 4008 true Chr3: 5207738-5211745 Arabidopsis thaliana
AT3G15430 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5207738-5208737 Arabidopsis thaliana
AT3G15430 1.0kb downstream 1.0kb downstream 4008 true Chr3: 5208738-5212745 Arabidopsis thaliana
AT3G15430 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5211746-5212745 Arabidopsis thaliana
AT3G15430 2.0kb upstream 2.0kb upstream 5008 true Chr3: 5206738-5211745 Arabidopsis thaliana
AT3G15430 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5206738-5208737 Arabidopsis thaliana
AT3G15430 2.0kb downstream 2.0kb downstream 5008 true Chr3: 5208738-5213745 Arabidopsis thaliana
AT3G15430 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5211746-5213745 Arabidopsis thaliana
AT3G15430 5.0kb upstream 5.0kb upstream 8008 true Chr3: 5203738-5211745 Arabidopsis thaliana
AT3G15430 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5203738-5208737 Arabidopsis thaliana
AT3G15430 5.0kb downstream 5.0kb downstream 8008 true Chr3: 5208738-5216745 Arabidopsis thaliana
AT3G15430 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5211746-5216745 Arabidopsis thaliana
AT3G15430 10.0kb upstream 10.0kb upstream 13008 true Chr3: 5198738-5211745 Arabidopsis thaliana
AT3G15430 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5198738-5208737 Arabidopsis thaliana
AT3G15430 10.0kb downstream 10.0kb downstream 13008 true Chr3: 5208738-5221745 Arabidopsis thaliana
AT3G15430 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5211746-5221745 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
122364693 5261 Brassicaceae View MSA
123832629 5264 Brassicales-Malvales View MSA
124338213 5266 SBM View MSA
124240020 5268 Malvidae View MSA
124063197 5270 Rosid View MSA
123736907 5271 Pentapetalae View MSA
122790897 5272 Eudicot View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.945        
cufflinks 12.347        
cufflinks 6.497       Low
cufflinks 12.308        
cufflinks 7.386        
cufflinks 14.405       High

0 Strain