Gene : AT3G15450 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1580
Name:  ? AT3G15450 Secondary Identifier:  ? PAC:19664359
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15450 0.5kb upstream 0.5kb upstream 1641 true Chr3: 5212484-5214124 Arabidopsis thaliana
AT3G15450 0.5kb upstream 0.5kb upstream 500 false Chr3: 5212484-5212983 Arabidopsis thaliana
AT3G15450 0.5kb downstream 0.5kb downstream 1641 true Chr3: 5212984-5214624 Arabidopsis thaliana
AT3G15450 0.5kb downstream 0.5kb downstream 500 false Chr3: 5214125-5214624 Arabidopsis thaliana
AT3G15450 1.0kb upstream 1.0kb upstream 2141 true Chr3: 5211984-5214124 Arabidopsis thaliana
AT3G15450 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5211984-5212983 Arabidopsis thaliana
AT3G15450 1.0kb downstream 1.0kb downstream 2141 true Chr3: 5212984-5215124 Arabidopsis thaliana
AT3G15450 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5214125-5215124 Arabidopsis thaliana
AT3G15450 2.0kb upstream 2.0kb upstream 3141 true Chr3: 5210984-5214124 Arabidopsis thaliana
AT3G15450 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5210984-5212983 Arabidopsis thaliana
AT3G15450 2.0kb downstream 2.0kb downstream 3141 true Chr3: 5212984-5216124 Arabidopsis thaliana
AT3G15450 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5214125-5216124 Arabidopsis thaliana
AT3G15450 5.0kb upstream 5.0kb upstream 6141 true Chr3: 5207984-5214124 Arabidopsis thaliana
AT3G15450 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5207984-5212983 Arabidopsis thaliana
AT3G15450 5.0kb downstream 5.0kb downstream 6141 true Chr3: 5212984-5219124 Arabidopsis thaliana
AT3G15450 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5214125-5219124 Arabidopsis thaliana
AT3G15450 10.0kb upstream 10.0kb upstream 11141 true Chr3: 5202984-5214124 Arabidopsis thaliana
AT3G15450 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5202984-5212983 Arabidopsis thaliana
AT3G15450 10.0kb downstream 10.0kb downstream 11141 true Chr3: 5212984-5224124 Arabidopsis thaliana
AT3G15450 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5214125-5224124 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373792 5261 Brassicaceae View MSA
123800621 5264 Brassicales-Malvales View MSA
124298015 5266 SBM View MSA
124149763 5268 Malvidae View MSA
123875504 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.197     High Low
cufflinks 105.915     High  
cufflinks 294.504     High High
cufflinks 110.187     High  
cufflinks 372.905     High High
cufflinks 72.522     High  

0 Strain