Gene : AT3G15490 A. thaliana TAIR10
Defline:  (1 of 12) PTHR12161 - UNCHARACTERIZED DUF292 Genomic Order:  1584
Name:  ? AT3G15490 Secondary Identifier:  ? PAC:19664159
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15490 0.5kb upstream 0.5kb upstream 2023 true Chr3: 5228624-5230646 Arabidopsis thaliana
AT3G15490 0.5kb upstream 0.5kb upstream 500 false Chr3: 5228624-5229123 Arabidopsis thaliana
AT3G15490 0.5kb downstream 0.5kb downstream 2023 true Chr3: 5229124-5231146 Arabidopsis thaliana
AT3G15490 0.5kb downstream 0.5kb downstream 500 false Chr3: 5230647-5231146 Arabidopsis thaliana
AT3G15490 1.0kb upstream 1.0kb upstream 2523 true Chr3: 5228124-5230646 Arabidopsis thaliana
AT3G15490 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5228124-5229123 Arabidopsis thaliana
AT3G15490 1.0kb downstream 1.0kb downstream 2523 true Chr3: 5229124-5231646 Arabidopsis thaliana
AT3G15490 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5230647-5231646 Arabidopsis thaliana
AT3G15490 2.0kb upstream 2.0kb upstream 3523 true Chr3: 5227124-5230646 Arabidopsis thaliana
AT3G15490 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5227124-5229123 Arabidopsis thaliana
AT3G15490 2.0kb downstream 2.0kb downstream 3523 true Chr3: 5229124-5232646 Arabidopsis thaliana
AT3G15490 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5230647-5232646 Arabidopsis thaliana
AT3G15490 5.0kb upstream 5.0kb upstream 6523 true Chr3: 5224124-5230646 Arabidopsis thaliana
AT3G15490 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5224124-5229123 Arabidopsis thaliana
AT3G15490 5.0kb downstream 5.0kb downstream 6523 true Chr3: 5229124-5235646 Arabidopsis thaliana
AT3G15490 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5230647-5235646 Arabidopsis thaliana
AT3G15490 10.0kb upstream 10.0kb upstream 11523 true Chr3: 5219124-5230646 Arabidopsis thaliana
AT3G15490 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5219124-5229123 Arabidopsis thaliana
AT3G15490 10.0kb downstream 10.0kb downstream 11523 true Chr3: 5229124-5240646 Arabidopsis thaliana
AT3G15490 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5230647-5240646 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380095 5261 Brassicaceae View MSA
123802557 5264 Brassicales-Malvales View MSA
124299744 5266 SBM View MSA
124151073 5268 Malvidae View MSA
124073435 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.055     Low  
cufflinks 0.07     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low

0 Strain