Gene : EXPA12 A. thaliana TAIR10
Primary Identifier:  ? AT3G15370 Defline:  (1 of 1) PTHR31867//PTHR31867:SF24 - FAMILY NOT NAMED // EXPANSIN-A12
Genomic Order:  1571 Name:  ? AT3G15370
Secondary Identifier:  ? PAC:19659439
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0 Pathways

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15370 0.5kb upstream 0.5kb upstream 2006 true Chr3: 5190072-5192077 Arabidopsis thaliana
AT3G15370 0.5kb upstream 0.5kb upstream 500 false Chr3: 5190072-5190571 Arabidopsis thaliana
AT3G15370 0.5kb downstream 0.5kb downstream 2006 true Chr3: 5190572-5192577 Arabidopsis thaliana
AT3G15370 0.5kb downstream 0.5kb downstream 500 false Chr3: 5192078-5192577 Arabidopsis thaliana
AT3G15370 1.0kb upstream 1.0kb upstream 2506 true Chr3: 5189572-5192077 Arabidopsis thaliana
AT3G15370 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5189572-5190571 Arabidopsis thaliana
AT3G15370 1.0kb downstream 1.0kb downstream 2506 true Chr3: 5190572-5193077 Arabidopsis thaliana
AT3G15370 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5192078-5193077 Arabidopsis thaliana
AT3G15370 2.0kb upstream 2.0kb upstream 3506 true Chr3: 5188572-5192077 Arabidopsis thaliana
AT3G15370 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5188572-5190571 Arabidopsis thaliana
AT3G15370 2.0kb downstream 2.0kb downstream 3506 true Chr3: 5190572-5194077 Arabidopsis thaliana
AT3G15370 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5192078-5194077 Arabidopsis thaliana
AT3G15370 5.0kb upstream 5.0kb upstream 6506 true Chr3: 5185572-5192077 Arabidopsis thaliana
AT3G15370 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5185572-5190571 Arabidopsis thaliana
AT3G15370 5.0kb downstream 5.0kb downstream 6506 true Chr3: 5190572-5197077 Arabidopsis thaliana
AT3G15370 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5192078-5197077 Arabidopsis thaliana
AT3G15370 10.0kb upstream 10.0kb upstream 11506 true Chr3: 5180572-5192077 Arabidopsis thaliana
AT3G15370 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5180572-5190571 Arabidopsis thaliana
AT3G15370 10.0kb downstream 10.0kb downstream 11506 true Chr3: 5190572-5202077 Arabidopsis thaliana
AT3G15370 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5192078-5202077 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372431 5261 Brassicaceae View MSA
123839628 5264 Brassicales-Malvales View MSA
124342399 5266 SBM View MSA
124254378 5268 Malvidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.26     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.27     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.537       High

0 Strain