Gene : AT3G15290 A. thaliana TAIR10
Defline:  (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  1557
Name:  ? AT3G15290 Secondary Identifier:  ? PAC:19662080
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15290 0.5kb upstream 0.5kb upstream 2360 true Chr3: 5144497-5146856 Arabidopsis thaliana
AT3G15290 0.5kb upstream 0.5kb upstream 500 false Chr3: 5144497-5144996 Arabidopsis thaliana
AT3G15290 0.5kb downstream 0.5kb downstream 2360 true Chr3: 5144997-5147356 Arabidopsis thaliana
AT3G15290 0.5kb downstream 0.5kb downstream 500 false Chr3: 5146857-5147356 Arabidopsis thaliana
AT3G15290 1.0kb upstream 1.0kb upstream 2860 true Chr3: 5143997-5146856 Arabidopsis thaliana
AT3G15290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5143997-5144996 Arabidopsis thaliana
AT3G15290 1.0kb downstream 1.0kb downstream 2860 true Chr3: 5144997-5147856 Arabidopsis thaliana
AT3G15290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5146857-5147856 Arabidopsis thaliana
AT3G15290 2.0kb upstream 2.0kb upstream 3860 true Chr3: 5142997-5146856 Arabidopsis thaliana
AT3G15290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5142997-5144996 Arabidopsis thaliana
AT3G15290 2.0kb downstream 2.0kb downstream 3860 true Chr3: 5144997-5148856 Arabidopsis thaliana
AT3G15290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5146857-5148856 Arabidopsis thaliana
AT3G15290 5.0kb upstream 5.0kb upstream 6860 true Chr3: 5139997-5146856 Arabidopsis thaliana
AT3G15290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5139997-5144996 Arabidopsis thaliana
AT3G15290 5.0kb downstream 5.0kb downstream 6860 true Chr3: 5144997-5151856 Arabidopsis thaliana
AT3G15290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5146857-5151856 Arabidopsis thaliana
AT3G15290 10.0kb upstream 10.0kb upstream 11860 true Chr3: 5134997-5146856 Arabidopsis thaliana
AT3G15290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5134997-5144996 Arabidopsis thaliana
AT3G15290 10.0kb downstream 10.0kb downstream 11860 true Chr3: 5144997-5156856 Arabidopsis thaliana
AT3G15290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5146857-5156856 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374167 5261 Brassicaceae View MSA
123831404 5264 Brassicales-Malvales View MSA
124342647 5266 SBM View MSA
124242360 5268 Malvidae View MSA
124065161 5270 Rosid View MSA
123739736 5271 Pentapetalae View MSA
122788599 5272 Eudicot View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.996        
cufflinks 12.228        
cufflinks 10.875       Low
cufflinks 12.191        
cufflinks 12.469        
cufflinks 11.985        

0 Strain