Gene : AT3G15300 A. thaliana TAIR10
Defline:  (1 of 32) PF05678 - VQ motif (VQ) Genomic Order:  1558
Name:  ? AT3G15300 Secondary Identifier:  ? PAC:19661699
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15300 0.5kb upstream 0.5kb upstream 1401 true Chr3: 5147405-5148805 Arabidopsis thaliana
AT3G15300 0.5kb upstream 0.5kb upstream 500 false Chr3: 5148306-5148805 Arabidopsis thaliana
AT3G15300 0.5kb downstream 0.5kb downstream 1401 true Chr3: 5146905-5148305 Arabidopsis thaliana
AT3G15300 0.5kb downstream 0.5kb downstream 500 false Chr3: 5146905-5147404 Arabidopsis thaliana
AT3G15300 1.0kb upstream 1.0kb upstream 1901 true Chr3: 5147405-5149305 Arabidopsis thaliana
AT3G15300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5148306-5149305 Arabidopsis thaliana
AT3G15300 1.0kb downstream 1.0kb downstream 1901 true Chr3: 5146405-5148305 Arabidopsis thaliana
AT3G15300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5146405-5147404 Arabidopsis thaliana
AT3G15300 2.0kb upstream 2.0kb upstream 2901 true Chr3: 5147405-5150305 Arabidopsis thaliana
AT3G15300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5148306-5150305 Arabidopsis thaliana
AT3G15300 2.0kb downstream 2.0kb downstream 2901 true Chr3: 5145405-5148305 Arabidopsis thaliana
AT3G15300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5145405-5147404 Arabidopsis thaliana
AT3G15300 5.0kb upstream 5.0kb upstream 5901 true Chr3: 5147405-5153305 Arabidopsis thaliana
AT3G15300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5148306-5153305 Arabidopsis thaliana
AT3G15300 5.0kb downstream 5.0kb downstream 5901 true Chr3: 5142405-5148305 Arabidopsis thaliana
AT3G15300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5142405-5147404 Arabidopsis thaliana
AT3G15300 10.0kb upstream 10.0kb upstream 10901 true Chr3: 5147405-5158305 Arabidopsis thaliana
AT3G15300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5148306-5158305 Arabidopsis thaliana
AT3G15300 10.0kb downstream 10.0kb downstream 10901 true Chr3: 5137405-5148305 Arabidopsis thaliana
AT3G15300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5137405-5147404 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370332 5261 Brassicaceae View MSA
123799942 5264 Brassicales-Malvales View MSA
124297410 5266 SBM View MSA
124252268 5268 Malvidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.16        
cufflinks 6.496        
cufflinks 0.705       Low
cufflinks 11.509       High
cufflinks 1.665        
cufflinks 6.407        

0 Strain