Gene : SPL5 A. thaliana TAIR10
Primary Identifier:  ? AT3G15270 Defline:  (1 of 2) PTHR31251:SF9 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4-RELATED
Genomic Order:  1555 Name:  ? AT3G15270
Secondary Identifier:  ? PAC:19664431
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15270 0.5kb upstream 0.5kb upstream 1484 true Chr3: 5140365-5141848 Arabidopsis thaliana
AT3G15270 0.5kb upstream 0.5kb upstream 500 false Chr3: 5141349-5141848 Arabidopsis thaliana
AT3G15270 0.5kb downstream 0.5kb downstream 1484 true Chr3: 5139865-5141348 Arabidopsis thaliana
AT3G15270 0.5kb downstream 0.5kb downstream 500 false Chr3: 5139865-5140364 Arabidopsis thaliana
AT3G15270 1.0kb upstream 1.0kb upstream 1984 true Chr3: 5140365-5142348 Arabidopsis thaliana
AT3G15270 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5141349-5142348 Arabidopsis thaliana
AT3G15270 1.0kb downstream 1.0kb downstream 1984 true Chr3: 5139365-5141348 Arabidopsis thaliana
AT3G15270 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5139365-5140364 Arabidopsis thaliana
AT3G15270 2.0kb upstream 2.0kb upstream 2984 true Chr3: 5140365-5143348 Arabidopsis thaliana
AT3G15270 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5141349-5143348 Arabidopsis thaliana
AT3G15270 2.0kb downstream 2.0kb downstream 2984 true Chr3: 5138365-5141348 Arabidopsis thaliana
AT3G15270 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5138365-5140364 Arabidopsis thaliana
AT3G15270 5.0kb upstream 5.0kb upstream 5984 true Chr3: 5140365-5146348 Arabidopsis thaliana
AT3G15270 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5141349-5146348 Arabidopsis thaliana
AT3G15270 5.0kb downstream 5.0kb downstream 5984 true Chr3: 5135365-5141348 Arabidopsis thaliana
AT3G15270 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5135365-5140364 Arabidopsis thaliana
AT3G15270 10.0kb upstream 10.0kb upstream 10984 true Chr3: 5140365-5151348 Arabidopsis thaliana
AT3G15270 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5141349-5151348 Arabidopsis thaliana
AT3G15270 10.0kb downstream 10.0kb downstream 10984 true Chr3: 5130365-5141348 Arabidopsis thaliana
AT3G15270 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5130365-5140364 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369079 5261 Brassicaceae View MSA
123838815 5264 Brassicales-Malvales View MSA
124347002 5266 SBM View MSA
124245609 5268 Malvidae View MSA
124068768 5270 Rosid View MSA
123745338 5271 Pentapetalae View MSA
122797834 5272 Eudicot View MSA
122050798 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351345 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.478       High
cufflinks 0.015     Low  
cufflinks 5.273        
cufflinks 0.016     Low  
cufflinks 3.445        
cufflinks 0.015     Low  

0 Strain