Gene : AT3G15090 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11695//PTHR11695:SF509 - ALCOHOL DEHYDROGENASE RELATED // RETICULON-4-INTERACTING PROTEIN 1 HOMOLOG, MITOCHONDRIAL Genomic Order:  1535
Name:  ? AT3G15090 Secondary Identifier:  ? PAC:19658492
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15090 0.5kb upstream 0.5kb upstream 2929 true Chr3: 5076189-5079117 Arabidopsis thaliana
AT3G15090 0.5kb upstream 0.5kb upstream 500 false Chr3: 5076189-5076688 Arabidopsis thaliana
AT3G15090 0.5kb downstream 0.5kb downstream 2929 true Chr3: 5076689-5079617 Arabidopsis thaliana
AT3G15090 0.5kb downstream 0.5kb downstream 500 false Chr3: 5079118-5079617 Arabidopsis thaliana
AT3G15090 1.0kb upstream 1.0kb upstream 3429 true Chr3: 5075689-5079117 Arabidopsis thaliana
AT3G15090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5075689-5076688 Arabidopsis thaliana
AT3G15090 1.0kb downstream 1.0kb downstream 3429 true Chr3: 5076689-5080117 Arabidopsis thaliana
AT3G15090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5079118-5080117 Arabidopsis thaliana
AT3G15090 2.0kb upstream 2.0kb upstream 4429 true Chr3: 5074689-5079117 Arabidopsis thaliana
AT3G15090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5074689-5076688 Arabidopsis thaliana
AT3G15090 2.0kb downstream 2.0kb downstream 4429 true Chr3: 5076689-5081117 Arabidopsis thaliana
AT3G15090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5079118-5081117 Arabidopsis thaliana
AT3G15090 5.0kb upstream 5.0kb upstream 7429 true Chr3: 5071689-5079117 Arabidopsis thaliana
AT3G15090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5071689-5076688 Arabidopsis thaliana
AT3G15090 5.0kb downstream 5.0kb downstream 7429 true Chr3: 5076689-5084117 Arabidopsis thaliana
AT3G15090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5079118-5084117 Arabidopsis thaliana
AT3G15090 10.0kb upstream 10.0kb upstream 12429 true Chr3: 5066689-5079117 Arabidopsis thaliana
AT3G15090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5066689-5076688 Arabidopsis thaliana
AT3G15090 10.0kb downstream 10.0kb downstream 12429 true Chr3: 5076689-5089117 Arabidopsis thaliana
AT3G15090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5079118-5089117 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380835 5261 Brassicaceae View MSA
123828998 5264 Brassicales-Malvales View MSA
124345794 5266 SBM View MSA
124240171 5268 Malvidae View MSA
124064989 5270 Rosid View MSA
123737760 5271 Pentapetalae View MSA
122788472 5272 Eudicot View MSA
122044013 5273 Angiosperm View MSA
121347528 5274 Embryophyte View MSA
123428381 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.907        
cufflinks 4.408       Low
cufflinks 4.526        
cufflinks 5.486       High
cufflinks 4.645        
cufflinks 4.988        

0 Strain