Gene : AT3G15190 A. thaliana TAIR10
Defline:  (1 of 1) K02968 - small subunit ribosomal protein S20 (RP-S20, rpsT) Genomic Order:  1547
Name:  ? AT3G15190 Secondary Identifier:  ? PAC:19663100
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15190 0.5kb upstream 0.5kb upstream 1975 true Chr3: 5115641-5117615 Arabidopsis thaliana
AT3G15190 0.5kb upstream 0.5kb upstream 500 false Chr3: 5115641-5116140 Arabidopsis thaliana
AT3G15190 0.5kb downstream 0.5kb downstream 1975 true Chr3: 5116141-5118115 Arabidopsis thaliana
AT3G15190 0.5kb downstream 0.5kb downstream 500 false Chr3: 5117616-5118115 Arabidopsis thaliana
AT3G15190 1.0kb upstream 1.0kb upstream 2475 true Chr3: 5115141-5117615 Arabidopsis thaliana
AT3G15190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5115141-5116140 Arabidopsis thaliana
AT3G15190 1.0kb downstream 1.0kb downstream 2475 true Chr3: 5116141-5118615 Arabidopsis thaliana
AT3G15190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5117616-5118615 Arabidopsis thaliana
AT3G15190 2.0kb upstream 2.0kb upstream 3475 true Chr3: 5114141-5117615 Arabidopsis thaliana
AT3G15190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5114141-5116140 Arabidopsis thaliana
AT3G15190 2.0kb downstream 2.0kb downstream 3475 true Chr3: 5116141-5119615 Arabidopsis thaliana
AT3G15190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5117616-5119615 Arabidopsis thaliana
AT3G15190 5.0kb upstream 5.0kb upstream 6475 true Chr3: 5111141-5117615 Arabidopsis thaliana
AT3G15190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5111141-5116140 Arabidopsis thaliana
AT3G15190 5.0kb downstream 5.0kb downstream 6475 true Chr3: 5116141-5122615 Arabidopsis thaliana
AT3G15190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5117616-5122615 Arabidopsis thaliana
AT3G15190 10.0kb upstream 10.0kb upstream 11475 true Chr3: 5106141-5117615 Arabidopsis thaliana
AT3G15190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5106141-5116140 Arabidopsis thaliana
AT3G15190 10.0kb downstream 10.0kb downstream 11475 true Chr3: 5116141-5127615 Arabidopsis thaliana
AT3G15190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5117616-5127615 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027102 5273 Angiosperm View MSA
122368816 5261 Brassicaceae View MSA
123828533 5264 Brassicales-Malvales View MSA
124344981 5266 SBM View MSA
124237575 5268 Malvidae View MSA
124065268 5270 Rosid View MSA
123738976 5271 Pentapetalae View MSA
122785943 5272 Eudicot View MSA
121345926 5274 Embryophyte View MSA
123425445 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.18     High  
cufflinks 21.284        
cufflinks 209.992     High High
cufflinks 17.832       Low
cufflinks 152.671     High  
cufflinks 20.868        

0 Strain