Gene : HEME1 A. thaliana TAIR10
Primary Identifier:  ? AT3G14930 Defline:  (1 of 1) PTHR21091//PTHR21091:SF105 - METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED // UROPORPHYRINOGEN DECARBOXYLASE 1, CHLOROPLASTIC
Genomic Order:  1518 Name:  ? AT3G14930
Secondary Identifier:  ? PAC:19660288
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CHLOROPHYLL-SYN Arabidopsis thaliana pathologic  
Athaliana HEME-BIOSYNTHESIS-II Arabidopsis thaliana pathologic  
Athaliana PWY-5918 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14930 0.5kb upstream 0.5kb upstream 2890 true Chr3: 5020070-5022959 Arabidopsis thaliana
AT3G14930 0.5kb upstream 0.5kb upstream 500 false Chr3: 5020070-5020569 Arabidopsis thaliana
AT3G14930 0.5kb downstream 0.5kb downstream 2890 true Chr3: 5020570-5023459 Arabidopsis thaliana
AT3G14930 0.5kb downstream 0.5kb downstream 500 false Chr3: 5022960-5023459 Arabidopsis thaliana
AT3G14930 1.0kb upstream 1.0kb upstream 3390 true Chr3: 5019570-5022959 Arabidopsis thaliana
AT3G14930 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5019570-5020569 Arabidopsis thaliana
AT3G14930 1.0kb downstream 1.0kb downstream 3390 true Chr3: 5020570-5023959 Arabidopsis thaliana
AT3G14930 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5022960-5023959 Arabidopsis thaliana
AT3G14930 2.0kb upstream 2.0kb upstream 4390 true Chr3: 5018570-5022959 Arabidopsis thaliana
AT3G14930 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5018570-5020569 Arabidopsis thaliana
AT3G14930 2.0kb downstream 2.0kb downstream 4390 true Chr3: 5020570-5024959 Arabidopsis thaliana
AT3G14930 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5022960-5024959 Arabidopsis thaliana
AT3G14930 5.0kb upstream 5.0kb upstream 7390 true Chr3: 5015570-5022959 Arabidopsis thaliana
AT3G14930 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5015570-5020569 Arabidopsis thaliana
AT3G14930 5.0kb downstream 5.0kb downstream 7390 true Chr3: 5020570-5027959 Arabidopsis thaliana
AT3G14930 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5022960-5027959 Arabidopsis thaliana
AT3G14930 10.0kb upstream 10.0kb upstream 12390 true Chr3: 5010570-5022959 Arabidopsis thaliana
AT3G14930 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5010570-5020569 Arabidopsis thaliana
AT3G14930 10.0kb downstream 10.0kb downstream 12390 true Chr3: 5020570-5032959 Arabidopsis thaliana
AT3G14930 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5022960-5032959 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361907 5261 Brassicaceae View MSA
123833836 5264 Brassicales-Malvales View MSA
124337414 5266 SBM View MSA
124240238 5268 Malvidae View MSA
124050452 5270 Rosid View MSA
123740427 5271 Pentapetalae View MSA
122787220 5272 Eudicot View MSA
122051227 5273 Angiosperm View MSA
121345426 5274 Embryophyte View MSA
123424899 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.061        
cufflinks 2.65        
cufflinks 26.551     High  
cufflinks 2.836        
cufflinks 23.733        
cufflinks 2.223       Low

0 Strain