Gene : AT3G14700 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14152//PTHR14152:SF5 - SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES // U4/U6.U5 TRI-SNRNP-ASSOCIATED PROTEIN 1 Genomic Order:  1496
Name:  ? AT3G14700 Secondary Identifier:  ? PAC:19664785
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14700 0.5kb upstream 0.5kb upstream 1581 true Chr3: 4939818-4941398 Arabidopsis thaliana
AT3G14700 0.5kb upstream 0.5kb upstream 500 false Chr3: 4939818-4940317 Arabidopsis thaliana
AT3G14700 0.5kb downstream 0.5kb downstream 1581 true Chr3: 4940318-4941898 Arabidopsis thaliana
AT3G14700 0.5kb downstream 0.5kb downstream 500 false Chr3: 4941399-4941898 Arabidopsis thaliana
AT3G14700 1.0kb upstream 1.0kb upstream 2081 true Chr3: 4939318-4941398 Arabidopsis thaliana
AT3G14700 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4939318-4940317 Arabidopsis thaliana
AT3G14700 1.0kb downstream 1.0kb downstream 2081 true Chr3: 4940318-4942398 Arabidopsis thaliana
AT3G14700 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4941399-4942398 Arabidopsis thaliana
AT3G14700 2.0kb upstream 2.0kb upstream 3081 true Chr3: 4938318-4941398 Arabidopsis thaliana
AT3G14700 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4938318-4940317 Arabidopsis thaliana
AT3G14700 2.0kb downstream 2.0kb downstream 3081 true Chr3: 4940318-4943398 Arabidopsis thaliana
AT3G14700 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4941399-4943398 Arabidopsis thaliana
AT3G14700 5.0kb upstream 5.0kb upstream 6081 true Chr3: 4935318-4941398 Arabidopsis thaliana
AT3G14700 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4935318-4940317 Arabidopsis thaliana
AT3G14700 5.0kb downstream 5.0kb downstream 6081 true Chr3: 4940318-4946398 Arabidopsis thaliana
AT3G14700 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4941399-4946398 Arabidopsis thaliana
AT3G14700 10.0kb upstream 10.0kb upstream 11081 true Chr3: 4930318-4941398 Arabidopsis thaliana
AT3G14700 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4930318-4940317 Arabidopsis thaliana
AT3G14700 10.0kb downstream 10.0kb downstream 11081 true Chr3: 4940318-4951398 Arabidopsis thaliana
AT3G14700 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4941399-4951398 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027698 5273 Angiosperm View MSA
124149810 5268 Malvidae View MSA
122374163 5261 Brassicaceae View MSA
123800694 5264 Brassicales-Malvales View MSA
124298074 5266 SBM View MSA
123875543 5270 Rosid View MSA
123459344 5271 Pentapetalae View MSA
122494736 5272 Eudicot View MSA
121297317 5274 Embryophyte View MSA
123335386 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.242        
cufflinks 1.956        
cufflinks 2.337        
cufflinks 2.381        
cufflinks 3.805       High
cufflinks 0.889       Low

0 Strain