Gene : UBP25 A. thaliana TAIR10
Primary Identifier:  ? AT3G14400 Defline:  (1 of 1) PF10163//PF13423 - Transcription factor e(y)2 (EnY2) // Ubiquitin carboxyl-terminal hydrolase (UCH_1)
Genomic Order:  1463 Name:  ? AT3G14400
Secondary Identifier:  ? PAC:19659149
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14400 0.5kb upstream 0.5kb upstream 4484 true Chr3: 4811532-4816015 Arabidopsis thaliana
AT3G14400 0.5kb upstream 0.5kb upstream 500 false Chr3: 4815516-4816015 Arabidopsis thaliana
AT3G14400 0.5kb downstream 0.5kb downstream 4484 true Chr3: 4811032-4815515 Arabidopsis thaliana
AT3G14400 0.5kb downstream 0.5kb downstream 500 false Chr3: 4811032-4811531 Arabidopsis thaliana
AT3G14400 1.0kb upstream 1.0kb upstream 4984 true Chr3: 4811532-4816515 Arabidopsis thaliana
AT3G14400 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4815516-4816515 Arabidopsis thaliana
AT3G14400 1.0kb downstream 1.0kb downstream 4984 true Chr3: 4810532-4815515 Arabidopsis thaliana
AT3G14400 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4810532-4811531 Arabidopsis thaliana
AT3G14400 2.0kb upstream 2.0kb upstream 5984 true Chr3: 4811532-4817515 Arabidopsis thaliana
AT3G14400 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4815516-4817515 Arabidopsis thaliana
AT3G14400 2.0kb downstream 2.0kb downstream 5984 true Chr3: 4809532-4815515 Arabidopsis thaliana
AT3G14400 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4809532-4811531 Arabidopsis thaliana
AT3G14400 5.0kb upstream 5.0kb upstream 8984 true Chr3: 4811532-4820515 Arabidopsis thaliana
AT3G14400 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4815516-4820515 Arabidopsis thaliana
AT3G14400 5.0kb downstream 5.0kb downstream 8984 true Chr3: 4806532-4815515 Arabidopsis thaliana
AT3G14400 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4806532-4811531 Arabidopsis thaliana
AT3G14400 10.0kb upstream 10.0kb upstream 13984 true Chr3: 4811532-4825515 Arabidopsis thaliana
AT3G14400 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4815516-4825515 Arabidopsis thaliana
AT3G14400 10.0kb downstream 10.0kb downstream 13984 true Chr3: 4801532-4815515 Arabidopsis thaliana
AT3G14400 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4801532-4811531 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369239 5261 Brassicaceae View MSA
123834365 5264 Brassicales-Malvales View MSA
124340030 5266 SBM View MSA
124254523 5268 Malvidae View MSA
124067125 5270 Rosid View MSA
123746951 5271 Pentapetalae View MSA
122790465 5272 Eudicot View MSA
122045970 5273 Angiosperm View MSA
121346163 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.666        
cufflinks 17.037       High
cufflinks 12.776        
cufflinks 16.035        
cufflinks 10.914       Low
cufflinks 15.72        

0 Strain