Gene : RAP2.2 A. thaliana TAIR10
Primary Identifier:  ? AT3G14230 Defline:  (1 of 3) PTHR31190//PTHR31190:SF27 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED
Genomic Order:  1444 Name:  ? AT3G14230
Secondary Identifier:  ? PAC:19660399
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14230 0.5kb upstream 0.5kb upstream 2496 true Chr3: 4737146-4739641 Arabidopsis thaliana
AT3G14230 0.5kb upstream 0.5kb upstream 500 false Chr3: 4739142-4739641 Arabidopsis thaliana
AT3G14230 0.5kb downstream 0.5kb downstream 2496 true Chr3: 4736646-4739141 Arabidopsis thaliana
AT3G14230 0.5kb downstream 0.5kb downstream 500 false Chr3: 4736646-4737145 Arabidopsis thaliana
AT3G14230 1.0kb upstream 1.0kb upstream 2996 true Chr3: 4737146-4740141 Arabidopsis thaliana
AT3G14230 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4739142-4740141 Arabidopsis thaliana
AT3G14230 1.0kb downstream 1.0kb downstream 2996 true Chr3: 4736146-4739141 Arabidopsis thaliana
AT3G14230 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4736146-4737145 Arabidopsis thaliana
AT3G14230 2.0kb upstream 2.0kb upstream 3996 true Chr3: 4737146-4741141 Arabidopsis thaliana
AT3G14230 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4739142-4741141 Arabidopsis thaliana
AT3G14230 2.0kb downstream 2.0kb downstream 3996 true Chr3: 4735146-4739141 Arabidopsis thaliana
AT3G14230 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4735146-4737145 Arabidopsis thaliana
AT3G14230 5.0kb upstream 5.0kb upstream 6996 true Chr3: 4737146-4744141 Arabidopsis thaliana
AT3G14230 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4739142-4744141 Arabidopsis thaliana
AT3G14230 5.0kb downstream 5.0kb downstream 6996 true Chr3: 4732146-4739141 Arabidopsis thaliana
AT3G14230 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4732146-4737145 Arabidopsis thaliana
AT3G14230 10.0kb upstream 10.0kb upstream 11996 true Chr3: 4737146-4749141 Arabidopsis thaliana
AT3G14230 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4739142-4749141 Arabidopsis thaliana
AT3G14230 10.0kb downstream 10.0kb downstream 11996 true Chr3: 4727146-4739141 Arabidopsis thaliana
AT3G14230 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4727146-4737145 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361439 5261 Brassicaceae View MSA
123840933 5264 Brassicales-Malvales View MSA
124341828 5266 SBM View MSA
124241578 5268 Malvidae View MSA
124061626 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.021        
cufflinks 53.102     High High
cufflinks 13.764        
cufflinks 49.67     High High
cufflinks 13.451        
cufflinks 37.287     High  

0 Strain