Gene : AT3G13990 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12758//PTHR12758:SF23 - APOPTOSIS INHIBITOR 5-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1415
Name:  ? AT3G13990 Secondary Identifier:  ? PAC:19662814
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13990 0.5kb upstream 0.5kb upstream 5544 true Chr3: 4625570-4631113 Arabidopsis thaliana
AT3G13990 0.5kb upstream 0.5kb upstream 500 false Chr3: 4630614-4631113 Arabidopsis thaliana
AT3G13990 0.5kb downstream 0.5kb downstream 5544 true Chr3: 4625070-4630613 Arabidopsis thaliana
AT3G13990 0.5kb downstream 0.5kb downstream 500 false Chr3: 4625070-4625569 Arabidopsis thaliana
AT3G13990 1.0kb upstream 1.0kb upstream 6044 true Chr3: 4625570-4631613 Arabidopsis thaliana
AT3G13990 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4630614-4631613 Arabidopsis thaliana
AT3G13990 1.0kb downstream 1.0kb downstream 6044 true Chr3: 4624570-4630613 Arabidopsis thaliana
AT3G13990 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4624570-4625569 Arabidopsis thaliana
AT3G13990 2.0kb upstream 2.0kb upstream 7044 true Chr3: 4625570-4632613 Arabidopsis thaliana
AT3G13990 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4630614-4632613 Arabidopsis thaliana
AT3G13990 2.0kb downstream 2.0kb downstream 7044 true Chr3: 4623570-4630613 Arabidopsis thaliana
AT3G13990 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4623570-4625569 Arabidopsis thaliana
AT3G13990 5.0kb upstream 5.0kb upstream 10044 true Chr3: 4625570-4635613 Arabidopsis thaliana
AT3G13990 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4630614-4635613 Arabidopsis thaliana
AT3G13990 5.0kb downstream 5.0kb downstream 10044 true Chr3: 4620570-4630613 Arabidopsis thaliana
AT3G13990 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4620570-4625569 Arabidopsis thaliana
AT3G13990 10.0kb upstream 10.0kb upstream 15044 true Chr3: 4625570-4640613 Arabidopsis thaliana
AT3G13990 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4630614-4640613 Arabidopsis thaliana
AT3G13990 10.0kb downstream 10.0kb downstream 15044 true Chr3: 4615570-4630613 Arabidopsis thaliana
AT3G13990 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4615570-4625569 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363037 5261 Brassicaceae View MSA
123828241 5264 Brassicales-Malvales View MSA
124339173 5266 SBM View MSA
124238369 5268 Malvidae View MSA
124066594 5270 Rosid View MSA
123736740 5271 Pentapetalae View MSA
122792885 5272 Eudicot View MSA
122045000 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.453        
cufflinks 5.865        
cufflinks 4.393       Low
cufflinks 6.193        
cufflinks 4.491       Low
cufflinks 6.695       High

0 Strain