Gene : HSP60-3A A. thaliana TAIR10
Primary Identifier:  ? AT3G13860 Defline:  (1 of 1) PTHR11353//PTHR11353:SF85 - CHAPERONIN // CHAPERONIN CPN60-LIKE 2, MITOCHONDRIAL
Genomic Order:  1400 Name:  ? AT3G13860
Secondary Identifier:  ? PAC:19661424
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13860 0.5kb upstream 0.5kb upstream 4263 true Chr3: 4561517-4565779 Arabidopsis thaliana
AT3G13860 0.5kb upstream 0.5kb upstream 500 false Chr3: 4565280-4565779 Arabidopsis thaliana
AT3G13860 0.5kb downstream 0.5kb downstream 4263 true Chr3: 4561017-4565279 Arabidopsis thaliana
AT3G13860 0.5kb downstream 0.5kb downstream 500 false Chr3: 4561017-4561516 Arabidopsis thaliana
AT3G13860 1.0kb upstream 1.0kb upstream 4763 true Chr3: 4561517-4566279 Arabidopsis thaliana
AT3G13860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4565280-4566279 Arabidopsis thaliana
AT3G13860 1.0kb downstream 1.0kb downstream 4763 true Chr3: 4560517-4565279 Arabidopsis thaliana
AT3G13860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4560517-4561516 Arabidopsis thaliana
AT3G13860 2.0kb upstream 2.0kb upstream 5763 true Chr3: 4561517-4567279 Arabidopsis thaliana
AT3G13860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4565280-4567279 Arabidopsis thaliana
AT3G13860 2.0kb downstream 2.0kb downstream 5763 true Chr3: 4559517-4565279 Arabidopsis thaliana
AT3G13860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4559517-4561516 Arabidopsis thaliana
AT3G13860 5.0kb upstream 5.0kb upstream 8763 true Chr3: 4561517-4570279 Arabidopsis thaliana
AT3G13860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4565280-4570279 Arabidopsis thaliana
AT3G13860 5.0kb downstream 5.0kb downstream 8763 true Chr3: 4556517-4565279 Arabidopsis thaliana
AT3G13860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4556517-4561516 Arabidopsis thaliana
AT3G13860 10.0kb upstream 10.0kb upstream 13763 true Chr3: 4561517-4575279 Arabidopsis thaliana
AT3G13860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4565280-4575279 Arabidopsis thaliana
AT3G13860 10.0kb downstream 10.0kb downstream 13763 true Chr3: 4551517-4565279 Arabidopsis thaliana
AT3G13860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4551517-4561516 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362678 5261 Brassicaceae View MSA
123833267 5264 Brassicales-Malvales View MSA
124346005 5266 SBM View MSA
124250267 5268 Malvidae View MSA
124067840 5270 Rosid View MSA
123743454 5271 Pentapetalae View MSA
122794275 5272 Eudicot View MSA
122050268 5273 Angiosperm View MSA
121346016 5274 Embryophyte View MSA
123428427 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.788        
cufflinks 10.508        
cufflinks 6.423       Low
cufflinks 12.616        
cufflinks 5.596       Low
cufflinks 15.672       High

0 Strain