Gene : AT3G13882 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14503:SF0 - 39S RIBOSOMAL PROTEIN L34, MITOCHONDRIAL Genomic Order:  1403
Name:  ? AT3G13882 Secondary Identifier:  ? PAC:19663937
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13882 0.5kb upstream 0.5kb upstream 2028 true Chr3: 4574021-4576048 Arabidopsis thaliana
AT3G13882 0.5kb upstream 0.5kb upstream 500 false Chr3: 4574021-4574520 Arabidopsis thaliana
AT3G13882 0.5kb downstream 0.5kb downstream 2028 true Chr3: 4574521-4576548 Arabidopsis thaliana
AT3G13882 0.5kb downstream 0.5kb downstream 500 false Chr3: 4576049-4576548 Arabidopsis thaliana
AT3G13882 1.0kb upstream 1.0kb upstream 2528 true Chr3: 4573521-4576048 Arabidopsis thaliana
AT3G13882 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4573521-4574520 Arabidopsis thaliana
AT3G13882 1.0kb downstream 1.0kb downstream 2528 true Chr3: 4574521-4577048 Arabidopsis thaliana
AT3G13882 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4576049-4577048 Arabidopsis thaliana
AT3G13882 2.0kb upstream 2.0kb upstream 3528 true Chr3: 4572521-4576048 Arabidopsis thaliana
AT3G13882 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4572521-4574520 Arabidopsis thaliana
AT3G13882 2.0kb downstream 2.0kb downstream 3528 true Chr3: 4574521-4578048 Arabidopsis thaliana
AT3G13882 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4576049-4578048 Arabidopsis thaliana
AT3G13882 5.0kb upstream 5.0kb upstream 6528 true Chr3: 4569521-4576048 Arabidopsis thaliana
AT3G13882 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4569521-4574520 Arabidopsis thaliana
AT3G13882 5.0kb downstream 5.0kb downstream 6528 true Chr3: 4574521-4581048 Arabidopsis thaliana
AT3G13882 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4576049-4581048 Arabidopsis thaliana
AT3G13882 10.0kb upstream 10.0kb upstream 11528 true Chr3: 4564521-4576048 Arabidopsis thaliana
AT3G13882 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4564521-4574520 Arabidopsis thaliana
AT3G13882 10.0kb downstream 10.0kb downstream 11528 true Chr3: 4574521-4586048 Arabidopsis thaliana
AT3G13882 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4576049-4586048 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330219 5261 Brassicaceae Singleton cluster - no MSA
123771482 5264 Brassicales-Malvales Singleton cluster - no MSA
124270010 5266 SBM Singleton cluster - no MSA
124126116 5268 Malvidae Singleton cluster - no MSA
123855048 5270 Rosid Singleton cluster - no MSA
123745173 5271 Pentapetalae View MSA
122791974 5272 Eudicot View MSA
122048627 5273 Angiosperm View MSA
121348088 5274 Embryophyte View MSA
123428848 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.78        
cufflinks 10.47        
cufflinks 9.004        
cufflinks 11.485       High
cufflinks 8.586       Low
cufflinks 10.987        

0 Strain