Gene : AT3G13650 A. thaliana TAIR10
Defline:  (1 of 5) PTHR21495//PTHR21495:SF59 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 20-RELATED Genomic Order:  1368
Name:  ? AT3G13650 Secondary Identifier:  ? PAC:19658441
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13650 0.5kb upstream 0.5kb upstream 1481 true Chr3: 4462392-4463872 Arabidopsis thaliana
AT3G13650 0.5kb upstream 0.5kb upstream 500 false Chr3: 4462392-4462891 Arabidopsis thaliana
AT3G13650 0.5kb downstream 0.5kb downstream 1481 true Chr3: 4462892-4464372 Arabidopsis thaliana
AT3G13650 0.5kb downstream 0.5kb downstream 500 false Chr3: 4463873-4464372 Arabidopsis thaliana
AT3G13650 1.0kb upstream 1.0kb upstream 1981 true Chr3: 4461892-4463872 Arabidopsis thaliana
AT3G13650 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4461892-4462891 Arabidopsis thaliana
AT3G13650 1.0kb downstream 1.0kb downstream 1981 true Chr3: 4462892-4464872 Arabidopsis thaliana
AT3G13650 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4463873-4464872 Arabidopsis thaliana
AT3G13650 2.0kb upstream 2.0kb upstream 2981 true Chr3: 4460892-4463872 Arabidopsis thaliana
AT3G13650 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4460892-4462891 Arabidopsis thaliana
AT3G13650 2.0kb downstream 2.0kb downstream 2981 true Chr3: 4462892-4465872 Arabidopsis thaliana
AT3G13650 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4463873-4465872 Arabidopsis thaliana
AT3G13650 5.0kb upstream 5.0kb upstream 5981 true Chr3: 4457892-4463872 Arabidopsis thaliana
AT3G13650 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4457892-4462891 Arabidopsis thaliana
AT3G13650 5.0kb downstream 5.0kb downstream 5981 true Chr3: 4462892-4468872 Arabidopsis thaliana
AT3G13650 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4463873-4468872 Arabidopsis thaliana
AT3G13650 10.0kb upstream 10.0kb upstream 10981 true Chr3: 4452892-4463872 Arabidopsis thaliana
AT3G13650 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4452892-4462891 Arabidopsis thaliana
AT3G13650 10.0kb downstream 10.0kb downstream 10981 true Chr3: 4462892-4473872 Arabidopsis thaliana
AT3G13650 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4463873-4473872 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378316 5261 Brassicaceae View MSA
123838229 5264 Brassicales-Malvales View MSA
124346747 5266 SBM View MSA
124250728 5268 Malvidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.834        
cufflinks 58.082     High  
cufflinks 0.918        
cufflinks 52.905     High  
cufflinks 0.63       Low
cufflinks 153.885     High High

0 Strain