Gene : FUS9 A. thaliana TAIR10
Primary Identifier:  ? AT3G13550 Defline:  (1 of 12) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5)
Genomic Order:  1357 Name:  ? AT3G13550
Secondary Identifier:  ? PAC:19664850
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13550 0.5kb upstream 0.5kb upstream 2035 true Chr3: 4423349-4425383 Arabidopsis thaliana
AT3G13550 0.5kb upstream 0.5kb upstream 500 false Chr3: 4424884-4425383 Arabidopsis thaliana
AT3G13550 0.5kb downstream 0.5kb downstream 2035 true Chr3: 4422849-4424883 Arabidopsis thaliana
AT3G13550 0.5kb downstream 0.5kb downstream 500 false Chr3: 4422849-4423348 Arabidopsis thaliana
AT3G13550 1.0kb upstream 1.0kb upstream 2535 true Chr3: 4423349-4425883 Arabidopsis thaliana
AT3G13550 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4424884-4425883 Arabidopsis thaliana
AT3G13550 1.0kb downstream 1.0kb downstream 2535 true Chr3: 4422349-4424883 Arabidopsis thaliana
AT3G13550 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4422349-4423348 Arabidopsis thaliana
AT3G13550 2.0kb upstream 2.0kb upstream 3535 true Chr3: 4423349-4426883 Arabidopsis thaliana
AT3G13550 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4424884-4426883 Arabidopsis thaliana
AT3G13550 2.0kb downstream 2.0kb downstream 3535 true Chr3: 4421349-4424883 Arabidopsis thaliana
AT3G13550 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4421349-4423348 Arabidopsis thaliana
AT3G13550 5.0kb upstream 5.0kb upstream 6535 true Chr3: 4423349-4429883 Arabidopsis thaliana
AT3G13550 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4424884-4429883 Arabidopsis thaliana
AT3G13550 5.0kb downstream 5.0kb downstream 6535 true Chr3: 4418349-4424883 Arabidopsis thaliana
AT3G13550 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4418349-4423348 Arabidopsis thaliana
AT3G13550 10.0kb upstream 10.0kb upstream 11535 true Chr3: 4423349-4434883 Arabidopsis thaliana
AT3G13550 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4424884-4434883 Arabidopsis thaliana
AT3G13550 10.0kb downstream 10.0kb downstream 11535 true Chr3: 4413349-4424883 Arabidopsis thaliana
AT3G13550 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4413349-4423348 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362176 5261 Brassicaceae View MSA
123828847 5264 Brassicales-Malvales View MSA
124345309 5266 SBM View MSA
124237855 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.141        
cufflinks 3.589        
cufflinks 4.869        
cufflinks 3.942        
cufflinks 5.213        
cufflinks 3.162       Low

0 Strain