Gene : CAX2 A. thaliana TAIR10
Primary Identifier:  ? AT3G13320 Defline:  (1 of 5) K07300 - Ca2+:H+ antiporter (chaA, CAX)
Genomic Order:  1327 Name:  ? AT3G13320
Secondary Identifier:  ? PAC:19662185
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13320 0.5kb upstream 0.5kb upstream 4323 true Chr3: 4314029-4318351 Arabidopsis thaliana
AT3G13320 0.5kb upstream 0.5kb upstream 500 false Chr3: 4314029-4314528 Arabidopsis thaliana
AT3G13320 0.5kb downstream 0.5kb downstream 4323 true Chr3: 4314529-4318851 Arabidopsis thaliana
AT3G13320 0.5kb downstream 0.5kb downstream 500 false Chr3: 4318352-4318851 Arabidopsis thaliana
AT3G13320 1.0kb upstream 1.0kb upstream 4823 true Chr3: 4313529-4318351 Arabidopsis thaliana
AT3G13320 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4313529-4314528 Arabidopsis thaliana
AT3G13320 1.0kb downstream 1.0kb downstream 4823 true Chr3: 4314529-4319351 Arabidopsis thaliana
AT3G13320 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4318352-4319351 Arabidopsis thaliana
AT3G13320 2.0kb upstream 2.0kb upstream 5823 true Chr3: 4312529-4318351 Arabidopsis thaliana
AT3G13320 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4312529-4314528 Arabidopsis thaliana
AT3G13320 2.0kb downstream 2.0kb downstream 5823 true Chr3: 4314529-4320351 Arabidopsis thaliana
AT3G13320 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4318352-4320351 Arabidopsis thaliana
AT3G13320 5.0kb upstream 5.0kb upstream 8823 true Chr3: 4309529-4318351 Arabidopsis thaliana
AT3G13320 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4309529-4314528 Arabidopsis thaliana
AT3G13320 5.0kb downstream 5.0kb downstream 8823 true Chr3: 4314529-4323351 Arabidopsis thaliana
AT3G13320 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4318352-4323351 Arabidopsis thaliana
AT3G13320 10.0kb upstream 10.0kb upstream 13823 true Chr3: 4304529-4318351 Arabidopsis thaliana
AT3G13320 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4304529-4314528 Arabidopsis thaliana
AT3G13320 10.0kb downstream 10.0kb downstream 13823 true Chr3: 4314529-4328351 Arabidopsis thaliana
AT3G13320 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4318352-4328351 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373359 5261 Brassicaceae View MSA
123840128 5264 Brassicales-Malvales View MSA
124348373 5266 SBM View MSA
124251400 5268 Malvidae View MSA
124071439 5270 Rosid View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.803        
cufflinks 16.663        
cufflinks 7.651       Low
cufflinks 16.834        
cufflinks 9.033        
cufflinks 17.541        

0 Strain