Gene : AT3G21290 A. thaliana TAIR10
Defline:  (1 of 1) PF07303 - Occludin homology domain (Occludin_ELL) Genomic Order:  2216
Name:  ? AT3G21290 Secondary Identifier:  ? PAC:19660265
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21290 0.5kb upstream 0.5kb upstream 7305 true Chr3: 7481631-7488935 Arabidopsis thaliana
AT3G21290 0.5kb upstream 0.5kb upstream 500 false Chr3: 7481631-7482130 Arabidopsis thaliana
AT3G21290 0.5kb downstream 0.5kb downstream 7305 true Chr3: 7482131-7489435 Arabidopsis thaliana
AT3G21290 0.5kb downstream 0.5kb downstream 500 false Chr3: 7488936-7489435 Arabidopsis thaliana
AT3G21290 1.0kb upstream 1.0kb upstream 7805 true Chr3: 7481131-7488935 Arabidopsis thaliana
AT3G21290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7481131-7482130 Arabidopsis thaliana
AT3G21290 1.0kb downstream 1.0kb downstream 7805 true Chr3: 7482131-7489935 Arabidopsis thaliana
AT3G21290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7488936-7489935 Arabidopsis thaliana
AT3G21290 2.0kb upstream 2.0kb upstream 8805 true Chr3: 7480131-7488935 Arabidopsis thaliana
AT3G21290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7480131-7482130 Arabidopsis thaliana
AT3G21290 2.0kb downstream 2.0kb downstream 8805 true Chr3: 7482131-7490935 Arabidopsis thaliana
AT3G21290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7488936-7490935 Arabidopsis thaliana
AT3G21290 5.0kb upstream 5.0kb upstream 11805 true Chr3: 7477131-7488935 Arabidopsis thaliana
AT3G21290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7477131-7482130 Arabidopsis thaliana
AT3G21290 5.0kb downstream 5.0kb downstream 11805 true Chr3: 7482131-7493935 Arabidopsis thaliana
AT3G21290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7488936-7493935 Arabidopsis thaliana
AT3G21290 10.0kb upstream 10.0kb upstream 16805 true Chr3: 7472131-7488935 Arabidopsis thaliana
AT3G21290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7472131-7482130 Arabidopsis thaliana
AT3G21290 10.0kb downstream 10.0kb downstream 16805 true Chr3: 7482131-7498935 Arabidopsis thaliana
AT3G21290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7488936-7498935 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367269 5261 Brassicaceae View MSA
123831791 5264 Brassicales-Malvales View MSA
124340432 5266 SBM View MSA
124238795 5268 Malvidae View MSA
124069075 5270 Rosid View MSA
123739076 5271 Pentapetalae View MSA
122788954 5272 Eudicot View MSA
122042901 5273 Angiosperm View MSA
121344929 5274 Embryophyte View MSA
123380129 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.889        
cufflinks 4.398        
cufflinks 3.426        
cufflinks 4.883       High
cufflinks 3.296       Low
cufflinks 4.129        

0 Strain