Gene : AT3G21090 A. thaliana TAIR10
Defline:  (1 of 3) PTHR19241//PTHR19241:SF247 - ATP-BINDING CASSETTE TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  2194
Name:  ? AT3G21090 Secondary Identifier:  ? PAC:19661982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21090 0.5kb upstream 0.5kb upstream 4104 true Chr3: 7391438-7395541 Arabidopsis thaliana
AT3G21090 0.5kb upstream 0.5kb upstream 500 false Chr3: 7395042-7395541 Arabidopsis thaliana
AT3G21090 0.5kb downstream 0.5kb downstream 4104 true Chr3: 7390938-7395041 Arabidopsis thaliana
AT3G21090 0.5kb downstream 0.5kb downstream 500 false Chr3: 7390938-7391437 Arabidopsis thaliana
AT3G21090 1.0kb upstream 1.0kb upstream 4604 true Chr3: 7391438-7396041 Arabidopsis thaliana
AT3G21090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7395042-7396041 Arabidopsis thaliana
AT3G21090 1.0kb downstream 1.0kb downstream 4604 true Chr3: 7390438-7395041 Arabidopsis thaliana
AT3G21090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7390438-7391437 Arabidopsis thaliana
AT3G21090 2.0kb upstream 2.0kb upstream 5604 true Chr3: 7391438-7397041 Arabidopsis thaliana
AT3G21090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7395042-7397041 Arabidopsis thaliana
AT3G21090 2.0kb downstream 2.0kb downstream 5604 true Chr3: 7389438-7395041 Arabidopsis thaliana
AT3G21090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7389438-7391437 Arabidopsis thaliana
AT3G21090 5.0kb upstream 5.0kb upstream 8604 true Chr3: 7391438-7400041 Arabidopsis thaliana
AT3G21090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7395042-7400041 Arabidopsis thaliana
AT3G21090 5.0kb downstream 5.0kb downstream 8604 true Chr3: 7386438-7395041 Arabidopsis thaliana
AT3G21090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7386438-7391437 Arabidopsis thaliana
AT3G21090 10.0kb upstream 10.0kb upstream 13604 true Chr3: 7391438-7405041 Arabidopsis thaliana
AT3G21090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7395042-7405041 Arabidopsis thaliana
AT3G21090 10.0kb downstream 10.0kb downstream 13604 true Chr3: 7381438-7395041 Arabidopsis thaliana
AT3G21090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7381438-7391437 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362964 5261 Brassicaceae View MSA
123838834 5264 Brassicales-Malvales View MSA
124336625 5266 SBM View MSA
124243166 5268 Malvidae View MSA
124067291 5270 Rosid View MSA
123743118 5271 Pentapetalae View MSA
122785890 5272 Eudicot View MSA
122043549 5273 Angiosperm View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.358        
cufflinks 1.245        
cufflinks 0.197     Low Low
cufflinks 2.089       High
cufflinks 0.286        
cufflinks 0.544        

0 Strain