Gene : LCR55 A. thaliana TAIR10
Primary Identifier:  ? AT3G20997 Defline:  (1 of 13) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED
Genomic Order:  2188 Name:  ? AT3G20997
Secondary Identifier:  ? PAC:19662978
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20997 0.5kb upstream 0.5kb upstream 839 true Chr3: 7362743-7363581 Arabidopsis thaliana
AT3G20997 0.5kb upstream 0.5kb upstream 500 false Chr3: 7363082-7363581 Arabidopsis thaliana
AT3G20997 0.5kb downstream 0.5kb downstream 839 true Chr3: 7362243-7363081 Arabidopsis thaliana
AT3G20997 0.5kb downstream 0.5kb downstream 500 false Chr3: 7362243-7362742 Arabidopsis thaliana
AT3G20997 1.0kb upstream 1.0kb upstream 1339 true Chr3: 7362743-7364081 Arabidopsis thaliana
AT3G20997 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7363082-7364081 Arabidopsis thaliana
AT3G20997 1.0kb downstream 1.0kb downstream 1339 true Chr3: 7361743-7363081 Arabidopsis thaliana
AT3G20997 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7361743-7362742 Arabidopsis thaliana
AT3G20997 2.0kb upstream 2.0kb upstream 2339 true Chr3: 7362743-7365081 Arabidopsis thaliana
AT3G20997 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7363082-7365081 Arabidopsis thaliana
AT3G20997 2.0kb downstream 2.0kb downstream 2339 true Chr3: 7360743-7363081 Arabidopsis thaliana
AT3G20997 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7360743-7362742 Arabidopsis thaliana
AT3G20997 5.0kb upstream 5.0kb upstream 5339 true Chr3: 7362743-7368081 Arabidopsis thaliana
AT3G20997 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7363082-7368081 Arabidopsis thaliana
AT3G20997 5.0kb downstream 5.0kb downstream 5339 true Chr3: 7357743-7363081 Arabidopsis thaliana
AT3G20997 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7357743-7362742 Arabidopsis thaliana
AT3G20997 10.0kb upstream 10.0kb upstream 10339 true Chr3: 7362743-7373081 Arabidopsis thaliana
AT3G20997 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7363082-7373081 Arabidopsis thaliana
AT3G20997 10.0kb downstream 10.0kb downstream 10339 true Chr3: 7352743-7363081 Arabidopsis thaliana
AT3G20997 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7352743-7362742 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122370998 5261 Brassicaceae View MSA
123841000 5264 Brassicales-Malvales View MSA
124322820 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain