Gene : AT3G22230 A. thaliana TAIR10
Defline:  (1 of 3) K02901 - large subunit ribosomal protein L27e (RP-L27e, RPL27) Genomic Order:  2321
Name:  ? AT3G22230 Secondary Identifier:  ? PAC:19661093
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22230 0.5kb upstream 0.5kb upstream 1131 true Chr3: 7843967-7845097 Arabidopsis thaliana
AT3G22230 0.5kb upstream 0.5kb upstream 500 false Chr3: 7844598-7845097 Arabidopsis thaliana
AT3G22230 0.5kb downstream 0.5kb downstream 1131 true Chr3: 7843467-7844597 Arabidopsis thaliana
AT3G22230 0.5kb downstream 0.5kb downstream 500 false Chr3: 7843467-7843966 Arabidopsis thaliana
AT3G22230 1.0kb upstream 1.0kb upstream 1631 true Chr3: 7843967-7845597 Arabidopsis thaliana
AT3G22230 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7844598-7845597 Arabidopsis thaliana
AT3G22230 1.0kb downstream 1.0kb downstream 1631 true Chr3: 7842967-7844597 Arabidopsis thaliana
AT3G22230 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7842967-7843966 Arabidopsis thaliana
AT3G22230 2.0kb upstream 2.0kb upstream 2631 true Chr3: 7843967-7846597 Arabidopsis thaliana
AT3G22230 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7844598-7846597 Arabidopsis thaliana
AT3G22230 2.0kb downstream 2.0kb downstream 2631 true Chr3: 7841967-7844597 Arabidopsis thaliana
AT3G22230 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7841967-7843966 Arabidopsis thaliana
AT3G22230 5.0kb upstream 5.0kb upstream 5631 true Chr3: 7843967-7849597 Arabidopsis thaliana
AT3G22230 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7844598-7849597 Arabidopsis thaliana
AT3G22230 5.0kb downstream 5.0kb downstream 5631 true Chr3: 7838967-7844597 Arabidopsis thaliana
AT3G22230 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7838967-7843966 Arabidopsis thaliana
AT3G22230 10.0kb upstream 10.0kb upstream 10631 true Chr3: 7843967-7854597 Arabidopsis thaliana
AT3G22230 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7844598-7854597 Arabidopsis thaliana
AT3G22230 10.0kb downstream 10.0kb downstream 10631 true Chr3: 7833967-7844597 Arabidopsis thaliana
AT3G22230 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7833967-7843966 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343830 5261 Brassicaceae View MSA
123783925 5264 Brassicales-Malvales View MSA
124282131 5266 SBM View MSA
124254119 5268 Malvidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 217.127     High  
cufflinks 253.201     High  
cufflinks 191.406     High  
cufflinks 270.543     High  
cufflinks 158.347     High Low
cufflinks 316.607     High High

0 Strain