Gene : NF-YA9 A. thaliana TAIR10
Primary Identifier:  ? AT3G20910 Defline:  (1 of 2) PTHR12632//PTHR12632:SF14 - TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-1-RELATED
Genomic Order:  2177 Name:  ? AT3G20910
Secondary Identifier:  ? PAC:19659217
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20910 0.5kb upstream 0.5kb upstream 2695 true Chr3: 7325882-7328576 Arabidopsis thaliana
AT3G20910 0.5kb upstream 0.5kb upstream 500 false Chr3: 7325882-7326381 Arabidopsis thaliana
AT3G20910 0.5kb downstream 0.5kb downstream 2695 true Chr3: 7326382-7329076 Arabidopsis thaliana
AT3G20910 0.5kb downstream 0.5kb downstream 500 false Chr3: 7328577-7329076 Arabidopsis thaliana
AT3G20910 1.0kb upstream 1.0kb upstream 3195 true Chr3: 7325382-7328576 Arabidopsis thaliana
AT3G20910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7325382-7326381 Arabidopsis thaliana
AT3G20910 1.0kb downstream 1.0kb downstream 3195 true Chr3: 7326382-7329576 Arabidopsis thaliana
AT3G20910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7328577-7329576 Arabidopsis thaliana
AT3G20910 2.0kb upstream 2.0kb upstream 4195 true Chr3: 7324382-7328576 Arabidopsis thaliana
AT3G20910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7324382-7326381 Arabidopsis thaliana
AT3G20910 2.0kb downstream 2.0kb downstream 4195 true Chr3: 7326382-7330576 Arabidopsis thaliana
AT3G20910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7328577-7330576 Arabidopsis thaliana
AT3G20910 5.0kb upstream 5.0kb upstream 7195 true Chr3: 7321382-7328576 Arabidopsis thaliana
AT3G20910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7321382-7326381 Arabidopsis thaliana
AT3G20910 5.0kb downstream 5.0kb downstream 7195 true Chr3: 7326382-7333576 Arabidopsis thaliana
AT3G20910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7328577-7333576 Arabidopsis thaliana
AT3G20910 10.0kb upstream 10.0kb upstream 12195 true Chr3: 7316382-7328576 Arabidopsis thaliana
AT3G20910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7316382-7326381 Arabidopsis thaliana
AT3G20910 10.0kb downstream 10.0kb downstream 12195 true Chr3: 7326382-7338576 Arabidopsis thaliana
AT3G20910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7328577-7338576 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369478 5261 Brassicaceae View MSA
123799785 5264 Brassicales-Malvales View MSA
124297271 5266 SBM View MSA
124149206 5268 Malvidae View MSA
124064408 5270 Rosid View MSA
123744202 5271 Pentapetalae View MSA
122796368 5272 Eudicot View MSA
122043560 5273 Angiosperm View MSA
121349728 5274 Embryophyte View MSA
123424382 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.412       Low
cufflinks 8.607       High
cufflinks 4.814        
cufflinks 9.518       High
cufflinks 5.931        
cufflinks 5.234        

0 Strain