Gene : PLT1 A. thaliana TAIR10
Primary Identifier:  ? AT3G20840 Defline:  (1 of 1) PTHR32467:SF22 - AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT1
Genomic Order:  2168 Name:  ? AT3G20840
Secondary Identifier:  ? PAC:19662921
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20840 0.5kb upstream 0.5kb upstream 3519 true Chr3: 7300175-7303693 Arabidopsis thaliana
AT3G20840 0.5kb upstream 0.5kb upstream 500 false Chr3: 7300175-7300674 Arabidopsis thaliana
AT3G20840 0.5kb downstream 0.5kb downstream 3519 true Chr3: 7300675-7304193 Arabidopsis thaliana
AT3G20840 0.5kb downstream 0.5kb downstream 500 false Chr3: 7303694-7304193 Arabidopsis thaliana
AT3G20840 1.0kb upstream 1.0kb upstream 4019 true Chr3: 7299675-7303693 Arabidopsis thaliana
AT3G20840 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7299675-7300674 Arabidopsis thaliana
AT3G20840 1.0kb downstream 1.0kb downstream 4019 true Chr3: 7300675-7304693 Arabidopsis thaliana
AT3G20840 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7303694-7304693 Arabidopsis thaliana
AT3G20840 2.0kb upstream 2.0kb upstream 5019 true Chr3: 7298675-7303693 Arabidopsis thaliana
AT3G20840 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7298675-7300674 Arabidopsis thaliana
AT3G20840 2.0kb downstream 2.0kb downstream 5019 true Chr3: 7300675-7305693 Arabidopsis thaliana
AT3G20840 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7303694-7305693 Arabidopsis thaliana
AT3G20840 5.0kb upstream 5.0kb upstream 8019 true Chr3: 7295675-7303693 Arabidopsis thaliana
AT3G20840 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7295675-7300674 Arabidopsis thaliana
AT3G20840 5.0kb downstream 5.0kb downstream 8019 true Chr3: 7300675-7308693 Arabidopsis thaliana
AT3G20840 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7303694-7308693 Arabidopsis thaliana
AT3G20840 10.0kb upstream 10.0kb upstream 13019 true Chr3: 7290675-7303693 Arabidopsis thaliana
AT3G20840 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7290675-7300674 Arabidopsis thaliana
AT3G20840 10.0kb downstream 10.0kb downstream 13019 true Chr3: 7300675-7313693 Arabidopsis thaliana
AT3G20840 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7303694-7313693 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
122375959 5261 Brassicaceae View MSA
123801096 5264 Brassicales-Malvales View MSA
124298435 5266 SBM View MSA
124247741 5268 Malvidae View MSA
124065940 5270 Rosid View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.44        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.471       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.639        

0 Strain