Gene : NEK5 A. thaliana TAIR10
Primary Identifier:  ? AT3G20860 Defline:  (1 of 2) PTHR24362//PTHR24362:SF258 - SERINE/THREONINE-PROTEIN KINASE NEK // SERINE/THREONINE-PROTEIN KINASE NEK5
Genomic Order:  2170 Name:  ? AT3G20860
Secondary Identifier:  ? PAC:19664852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20860 0.5kb upstream 0.5kb upstream 2788 true Chr3: 7305647-7308434 Arabidopsis thaliana
AT3G20860 0.5kb upstream 0.5kb upstream 500 false Chr3: 7305647-7306146 Arabidopsis thaliana
AT3G20860 0.5kb downstream 0.5kb downstream 2788 true Chr3: 7306147-7308934 Arabidopsis thaliana
AT3G20860 0.5kb downstream 0.5kb downstream 500 false Chr3: 7308435-7308934 Arabidopsis thaliana
AT3G20860 1.0kb upstream 1.0kb upstream 3288 true Chr3: 7305147-7308434 Arabidopsis thaliana
AT3G20860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7305147-7306146 Arabidopsis thaliana
AT3G20860 1.0kb downstream 1.0kb downstream 3288 true Chr3: 7306147-7309434 Arabidopsis thaliana
AT3G20860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7308435-7309434 Arabidopsis thaliana
AT3G20860 2.0kb upstream 2.0kb upstream 4288 true Chr3: 7304147-7308434 Arabidopsis thaliana
AT3G20860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7304147-7306146 Arabidopsis thaliana
AT3G20860 2.0kb downstream 2.0kb downstream 4288 true Chr3: 7306147-7310434 Arabidopsis thaliana
AT3G20860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7308435-7310434 Arabidopsis thaliana
AT3G20860 5.0kb upstream 5.0kb upstream 7288 true Chr3: 7301147-7308434 Arabidopsis thaliana
AT3G20860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7301147-7306146 Arabidopsis thaliana
AT3G20860 5.0kb downstream 5.0kb downstream 7288 true Chr3: 7306147-7313434 Arabidopsis thaliana
AT3G20860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7308435-7313434 Arabidopsis thaliana
AT3G20860 10.0kb upstream 10.0kb upstream 12288 true Chr3: 7296147-7308434 Arabidopsis thaliana
AT3G20860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7296147-7306146 Arabidopsis thaliana
AT3G20860 10.0kb downstream 10.0kb downstream 12288 true Chr3: 7306147-7318434 Arabidopsis thaliana
AT3G20860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7308435-7318434 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367853 5261 Brassicaceae View MSA
123833303 5264 Brassicales-Malvales View MSA
124345204 5266 SBM View MSA
124244085 5268 Malvidae View MSA
124069702 5270 Rosid View MSA
123749307 5271 Pentapetalae View MSA
122794727 5272 Eudicot View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.543        
cufflinks 8.257        
cufflinks 1.707        
cufflinks 7.898        
cufflinks 0.971       Low
cufflinks 12.708       High

0 Strain